KEGG   Pyrodictium delaneyi: Pyrde_0473
Entry
Pyrde_0473        CDS       T04114                                 
Name
(GenBank) ribosome biogenesis protein
  KO
K14568  rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
Organism
pdl  Pyrodictium delaneyi
Pathway
pdl03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pdl00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    Pyrde_0473
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pdl03009]
    Pyrde_0473
Enzymes [BR:pdl01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.260  rRNA small subunit pseudouridine methyltransferase Nep1
     Pyrde_0473
Ribosome biogenesis [BR:pdl03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    Pyrde_0473
SSDB
Motif
Pfam: EMG1
Other DBs
NCBI-ProteinID: ALL00523
UniProt: A0A0P0N0Y3
LinkDB
Position
472002..472712
AA seq 236 aa
MATKQDTKHRLKLVLAEAALETVPREIWGHPAVYKHARRRGKPSASILLDRSIHHQAMKR
LPNAEKRGRPDIVHIALLEALGSPLNREGLLEVYVHTLNDYVIFIDPSTRLPRNYNRFVG
LIEQLFDEGQVPPEGKPLLWIRPMTLERLLQEIGATHVILLAEDGEHRRLRDIAGEALQH
APATAVVVGAFPHGDFNEETRRLATRVYSIYRGEPLETWTVVSHLLAVAADMLNII
NT seq 711 nt   +upstreamnt  +downstreamnt
ttggccactaaacaagacacgaagcatagactaaaacttgtactggcagaggcagccctc
gaaactgtgccacgcgagatctggggacaccccgcagtctacaaacatgcccgcaggagg
ggcaaaccatcagcctccatacttctagaccgtagtatacaccatcaagcaatgaagagg
cttccaaacgcggagaagcgtggaaggccagatatagtccacatagcgctgctagaagcc
ttaggtagtccgctgaacagggaaggccttctagaagtctacgtacacacccttaacgat
tacgtcatattcattgatccctctacaaggcttccgcgtaactacaaccggttcgtcggc
ttgatagaacagctattcgatgaaggacaggtaccgccggagggtaaaccactgctatgg
atccggcccatgacgctcgagcggcttctccaagagattggtgctacccatgtcatcttg
ctagccgaggatggcgaacaccgcaggcttagagacatagctggagaagccctccagcat
gcccctgctactgctgtagtagtaggcgcgttcccacacggtgatttcaacgaggagact
aggaggctagcaacacgggtctatagcatctatcgcggtgagccgctagagacatggacc
gtagtctctcatctactagctgtggcagccgacatgcttaacataatttag

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