KEGG   Pyrodictium delaneyi: Pyrde_0515
Entry
Pyrde_0515        CDS       T04114                                 
Name
(GenBank) DNA polymerase sliding clamp B2
  KO
K04802  proliferating cell nuclear antigen
Organism
pdl  Pyrodictium delaneyi
Pathway
pdl03030  DNA replication
pdl03410  Base excision repair
pdl03420  Nucleotide excision repair
pdl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pdl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Pyrde_0515
   03410 Base excision repair
    Pyrde_0515
   03420 Nucleotide excision repair
    Pyrde_0515
   03430 Mismatch repair
    Pyrde_0515
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pdl03032]
    Pyrde_0515
   03400 DNA repair and recombination proteins [BR:pdl03400]
    Pyrde_0515
DNA replication proteins [BR:pdl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Pyrde_0515
DNA repair and recombination proteins [BR:pdl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Pyrde_0515
   MMR (mismatch excision repair)
    Other MMR factors
     Pyrde_0515
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    Pyrde_0515
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad1
Other DBs
NCBI-ProteinID: ALL00565
UniProt: A0A0P0N219
LinkDB
Position
complement(513281..514021)
AA seq 246 aa
MKIVFFDARVWRYLVSAISKVIEEGVFVVDPEEGLMFRAMDPSHVIMLDMRFPRDSFEEF
DVEQRTELGVNLEDVAKILRRASKEDRLEITADEDSISFAFIGKSYRKFTLPLLDITAEQ
LPEPQLEFKANIKVMSDVYRDTIKDVELIGDVIRFVASSDEFKVASSSELGEAEIIYTRE
SGSLIDLVVEDMQQASYTLEYFSDLSGASRVADTITIQFSTDMPALVEHELPQGAKFSFL
IAPRVE
NT seq 741 nt   +upstreamnt  +downstreamnt
ttgaaaatagtgttctttgatgcccgtgtatggaggtatcttgtctcagcaatatctaag
gtcatagaggagggtgtgttcgttgtagaccccgaggaggggttaatgtttagagctatg
gacccctctcacgtcataatgttagatatgaggtttccgcgagattcattcgaggagttt
gatgtagaacagcgcactgagcttggcgtgaacctcgaggatgttgccaagatattgcga
cgtgcaagtaaggaggatcgccttgagataaccgctgacgaggattccatatcgttcgcg
ttcatagggaagagctaccggaagtttacgcttccgttactcgatatcacggcagagcag
cttccagagccccaattagagtttaaggctaacattaaggttatgagtgatgtctaccgc
gatacgataaaggatgtggaacttatcggtgacgtgataaggtttgtggcgagtagcgat
gaatttaaggtggcctcttcgagtgaactaggtgaggcagagataatctatacacgtgag
agcggcagcctcatagaccttgtggtcgaggatatgcaacaggctagctatactctggag
tactttagtgacctctcgggggcgtctcgcgtagcagatacaataacgatacagttcagc
acagatatgccagcactagtagagcacgagctacctcaaggagccaagtttagtttcctc
atagccccgagggtagagtaa

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