Pyrodictium delaneyi: Pyrde_0519
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Entry
Pyrde_0519 CDS
T04114
Name
(GenBank) hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
pdl
Pyrodictium delaneyi
Pathway
pdl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pyrde_0519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdl03019
]
Pyrde_0519
Messenger RNA biogenesis [BR:
pdl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Pyrde_0519
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
Pyrde_0519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
Auto_anti-p27
Zn_ribbon_Nudix
C1_1
FtrD-like
Zn_ribbon_recom
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
ALL00569
UniProt:
A0A0N7JCX0
LinkDB
All DBs
Position
complement(516158..516760)
Genome browser
AA seq
200 aa
AA seq
DB search
MLRSVEELAGRRVFPGEPLCTVEEFIPGEGVYVDDGYIRAARFGQVEVDLVTRRISVKPV
SLKPRLPKRNSIVYGAVYAVPRDELALVKIFADERMVPYNGTFSGVLHILQVADTPGGKS
MYDFVKPGDFIRATVLSSAIPYMLSIKRSQDGVVLAYCSVCGSPLYRIPGSPRLACLRCG
NEEQRRVSPLYILSTRRRRR
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgctaagaagtgtcgaggagctggcagggcgtagagtcttccctggcgagccattgtgt
acagtagaggaattcatacctggcgagggagtctatgttgacgacggctatatacgtgca
gcgaggtttggtcaggtagaggtagacctcgtgacccgtaggataagcgtgaagcctgta
tcactgaagcctaggcttcctaagaggaatagtatagtatatggtgctgtttatgcagtg
ccgcgcgacgagctagctctcgtcaagatatttgctgacgagcgtatggtgccctataac
gggacgtttagcggtgtgctacatatactccaggtggctgatacacctggaggcaagagt
atgtatgacttcgtgaagcctggtgacttcatccgtgccactgtattgtcatcggctatc
ccatacatgctttcaattaagagatcgcaggatggtgtggtacttgcttactgttctgtg
tgtggttcacctctataccgtataccaggtagtccacgtctagcttgtctacgctgtgga
aacgaggagcagcgacgcgtatcaccgctctatatactctcaacacggcgtagaagaaga
tag
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integrated database retrieval system