KEGG   Pyrodictium delaneyi: Pyrde_0519
Entry
Pyrde_0519        CDS       T04114                                 
Name
(GenBank) hypothetical protein
  KO
K07573  exosome complex component CSL4
Organism
pdl  Pyrodictium delaneyi
Pathway
pdl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pdl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Pyrde_0519
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdl03019]
    Pyrde_0519
Messenger RNA biogenesis [BR:pdl03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     Pyrde_0519
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     Pyrde_0519
SSDB
Motif
Pfam: ECR1_N Auto_anti-p27 Zn_ribbon_Nudix C1_1 FtrD-like Zn_ribbon_recom DNA_ligase_ZBD
Other DBs
NCBI-ProteinID: ALL00569
UniProt: A0A0N7JCX0
LinkDB
Position
complement(516158..516760)
AA seq 200 aa
MLRSVEELAGRRVFPGEPLCTVEEFIPGEGVYVDDGYIRAARFGQVEVDLVTRRISVKPV
SLKPRLPKRNSIVYGAVYAVPRDELALVKIFADERMVPYNGTFSGVLHILQVADTPGGKS
MYDFVKPGDFIRATVLSSAIPYMLSIKRSQDGVVLAYCSVCGSPLYRIPGSPRLACLRCG
NEEQRRVSPLYILSTRRRRR
NT seq 603 nt   +upstreamnt  +downstreamnt
atgctaagaagtgtcgaggagctggcagggcgtagagtcttccctggcgagccattgtgt
acagtagaggaattcatacctggcgagggagtctatgttgacgacggctatatacgtgca
gcgaggtttggtcaggtagaggtagacctcgtgacccgtaggataagcgtgaagcctgta
tcactgaagcctaggcttcctaagaggaatagtatagtatatggtgctgtttatgcagtg
ccgcgcgacgagctagctctcgtcaagatatttgctgacgagcgtatggtgccctataac
gggacgtttagcggtgtgctacatatactccaggtggctgatacacctggaggcaagagt
atgtatgacttcgtgaagcctggtgacttcatccgtgccactgtattgtcatcggctatc
ccatacatgctttcaattaagagatcgcaggatggtgtggtacttgcttactgttctgtg
tgtggttcacctctataccgtataccaggtagtccacgtctagcttgtctacgctgtgga
aacgaggagcagcgacgcgtatcaccgctctatatactctcaacacggcgtagaagaaga
tag

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