KEGG   Pyrodictium delaneyi: Pyrde_0558
Entry
Pyrde_0558        CDS       T04114                                 
Name
(GenBank) DNA polymerase sliding clamp subunit
  KO
K04802  proliferating cell nuclear antigen
Organism
pdl  Pyrodictium delaneyi
Pathway
pdl03030  DNA replication
pdl03410  Base excision repair
pdl03420  Nucleotide excision repair
pdl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pdl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Pyrde_0558
   03410 Base excision repair
    Pyrde_0558
   03420 Nucleotide excision repair
    Pyrde_0558
   03430 Mismatch repair
    Pyrde_0558
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pdl03032]
    Pyrde_0558
   03400 DNA repair and recombination proteins [BR:pdl03400]
    Pyrde_0558
DNA replication proteins [BR:pdl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Pyrde_0558
DNA repair and recombination proteins [BR:pdl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Pyrde_0558
   MMR (mismatch excision repair)
    Other MMR factors
     Pyrde_0558
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    Pyrde_0558
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad1 Rad9
Other DBs
NCBI-ProteinID: ALL00608
UniProt: A0A0P0N2R0
LinkDB
Position
557542..558291
AA seq 249 aa
MAKARLSYPDAKSFYNMLDAISKIVDEVTMIITNDGIKAIALDPAHVALITIELPPESFI
EYEVEGDEVKLGFNVANTAKLIKRGKKGDKLDIEVDEERVTWSIVGATIKRYRVLNLDVP
VPEIPEAQLEFKIRVAMIVDPFKNALKDAEAVGDTVELEAPDESTFIIRGVGAATAEAKI
RSDSPAVVEFSVDEPGKSAYSIDYLKHVVSLTKVADTISIEFSQDMPLRLQFQLPAGGKV
TYLLAPKVA
NT seq 750 nt   +upstreamnt  +downstreamnt
atggcgaaagctagactgtcatatcctgacgcaaagtcgttctacaacatgcttgacgct
atatccaagatagtggatgaagttacaatgataataacaaatgacggtatcaaagcaata
gcgctggaccctgctcacgttgcactaataactatagagttgccaccagagagcttcata
gagtacgaggttgagggcgacgaagtaaagctaggattcaacgtagcgaacacggctaag
ctaatcaaacgaggaaagaaaggagacaagctagacatagaagtagacgaagagagagtt
acatggtcaatcgtaggtgctactataaagcgctaccgtgtactaaaccttgacgttccc
gtccctgagatcccggaggctcagctcgagttcaagataagggtagcaatgatagtcgat
cccttcaagaatgcattgaaggacgccgaagctgttggcgatacggtagagctagaagcc
cccgacgagagcacgttcatcataagaggtgtgggagctgcgacagctgaggctaagatc
agaagtgactcaccggcggtagtagagtttagcgtcgacgagccaggaaagtcggcctat
agcatagactatctaaaacatgtcgtctcgctaacaaaagttgccgacacaatatcaata
gagttctcgcaggatatgccactgaggctacagttccagctgccagccggaggtaaggta
acctatctgctagcacccaaagtagcataa

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