Pyrodictium delaneyi: Pyrde_0593
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Entry
Pyrde_0593 CDS
T04114
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
pdl
Pyrodictium delaneyi
Pathway
pdl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pdl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Pyrde_0593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdl03021
]
Pyrde_0593
Transcription machinery [BR:
pdl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Pyrde_0593
Prokaryotic type
Archaeal type
TFB
Pyrde_0593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Cyclin_C
HTH_AsnC-type
HTH_Tnp_ISL3
Cyclin_N
baeRF_family2
Motif
Other DBs
NCBI-ProteinID:
ALL00643
UniProt:
A0A0P0N2S4
LinkDB
All DBs
Position
589301..590236
Genome browser
AA seq
311 aa
AA seq
DB search
MVVEEYIEKASGDREEKCPPEYIVFDEERGEYICTLTGEVVEETVIDTGPEWRAYTPEEK
TRRSRVGSPLTHTLPDYGILTTISGYRDATGRKLEARLRIEASRLRRLQAKLRATTSIEK
NIEQAAREITRLVEALNLPRSIIDTAMMIYRQAAEKGLVRGRSLESMAAAAVYAACRIRG
IPRGIDDISEMVKGGRKEVARCYRLIVRELKLRMPIVDPVRYVSRITSALRLSPAVERRA
AEILMQARRMGLTAGKDPAGLAAAAIYIAALELGERRTQKEIAAAAGVTEVTVRNRYKEL
VQRLNIPLPAQ
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
ttggtagtcgaggagtatattgaaaaggcctcgggggatagggaggagaagtgtccgccg
gaatatatcgtgtttgatgaggagcgtggtgagtatatctgtacgctcaccggcgaagtg
gttgaggagactgttatagacactggtcccgagtggagagcctacacgcccgaggagaag
acacgcaggagccgtgtcggtagccctctaacacatacgctccccgactacggtatacta
accaccatatccgggtaccgggatgcgaccggacgcaagctagaggcacgtctccgtata
gaggcaagccgtctacgtaggctccaggccaagctccgtgcaaccacaagcatagagaag
aacatagagcaagctgcccgcgagataacacgtctagtcgaggcactcaatctgcctcgc
agtataattgataccgctatgatgatctataggcaggctgcggagaagggtctagtacgc
gggcgtagtctcgaatctatggctgctgcagcagtttatgcggcttgtaggatccgcggc
ataccgcgcggcatagacgatatatctgaaatggtcaagggtggtcgtaaagaggtagcc
cggtgctatagactaatagtgcgtgagcttaagctacgtatgcctatagtagacccggtg
cgctatgtatctagaattacatctgctctacgccttagccctgcggtcgaacggcgtgca
gcagagatactcatgcaagcgcgtcggatgggactaaccgctggtaaggaccctgcagga
ctagctgctgcagctatatatatagcagcattagagcttggagagagacgcacacaaaaa
gagatagcagcagcggctggtgtaactgaggtaactgtgcgtaaccgctacaaagaactc
gttcaaagactcaacatccctctaccggcccagtaa
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