KEGG   Pyrodictium delaneyi: Pyrde_1034
Entry
Pyrde_1034        CDS       T04114                                 
Name
(GenBank) ATP dependent helicase, Lhr family
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pdl  Pyrodictium delaneyi
Brite
KEGG Orthology (KO) [BR:pdl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdl03400]
    Pyrde_1034
Enzymes [BR:pdl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Pyrde_1034
    5.6.2.6  RNA 3'-5' helicase
     Pyrde_1034
DNA repair and recombination proteins [BR:pdl03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Pyrde_1034
SSDB
Motif
Pfam: DEAD DEAD_assoc Helicase_C WHD_Lhr ResIII Cas3-like_C_2 DEXQc_Suv3 Zn_ribbon_RPAB4 DUF4379 HypA AAA_19 DUF5817 Zn_ribbon_8 DUF7836
Other DBs
NCBI-ProteinID: ALL01082
UniProt: A0A0P0N364
LinkDB
Position
complement(1023523..1026393)
AA seq 956 aa
MNAQERIEKRRVSGAFRLLHPLLQRVLEKHGYVKPTEIQDKAIPEILRGNNVLVIAPTGS
GKTEAALLPVLSRLIGVRSRGIYCIYITPLRSLNRDIFKRMSGIASSLGLDLEVRHGDST
TAEKRRFLENPPHIMVTTPESFYFLLSVEKFRHNINNLKYIVIDEIHELVSDKRGAELSL
ALERVARLYTKARLQLIGLSATVSNPYLVAKLIMGERYVRIIEAEKTKKRYSILVTAPGD
SSKNSNNDTNSVRSRVHNETLTRVNLIKNILAKSRGNVIVFVNTRDTAEVLGALLKQVVG
DEFIEVHHGSLSRDKRVDAEQKLKSGKIKALVATSSLELGIDIGSIDLVIQYMSPRQVVK
LVQRVGRAGHRAGSVSRGVIVASNNIFDILESAVIAARAMRGNLENIPLYNKPYDALIHQ
VAGMIIESGEIDVNKLYNVITSSGYYRDLSIDELYQILYYMDSSRIARAKESRVSIGSMS
KSYYFSVTMIPDTRQYNVYEVASGKKLGVLDEEFVATLEKEDKFVLGGRVWEVVDISEDH
VRVKPAREDRLIPPAWEGDLIPVEYGVARELGSILRRYEEIGERVLDNYPLDDNARRIIV
DRITRHISKGLPLPTDKRIVIEHYGDTFIIYSFLGSRGNKALEYLLSAYISEIKGYSPVT
TSTPYIVAVRLASHERPSFIADSLMKLASFTREDVDNLLRKAIYRSRLYQWILLYVALRA
GAVKRTRETNLKQIKTIILKLKDTILGEEAYKEINVRKVDINALYSFLERIRNKKVEVRT
VSLRITSPITEDAVAEARFGDRVSVDSLPSTILVEAIKRKLSSKEVIFLCVMCGKTWSRR
LSHLSDKIECPRCGARMIYPALSRERIEVAKIVLEKIKHNSRLSNSEKKLSREVMDAAGL
VLNYGKKAIEALVSTGVGVHTAKRVLQKLVFGEEAFYRALVEAEVKYHKYKHRLEK
NT seq 2871 nt   +upstreamnt  +downstreamnt
atgaacgcgcaggagagaattgagaagcgtagagtaagtggagcgtttagactgctacac
ccgctacttcagcgtgtactagagaaacacgggtacgtaaaacctaccgagatacaagat
aaggccataccagagattcttagaggtaacaacgtgttagttatagcgccgacaggcagt
ggtaagactgaagccgcccttcttcccgtactctcgagactcataggtgtacgttccaga
ggcatatattgcatatacattactcctttacgtagtcttaaccgtgatatattcaagcga
atgtcaggtatagcttcgagtcttggtctagatctcgaggttaggcatggagatagtact
actgcggagaagagaaggttcctcgagaatccaccgcacataatggtaacaacaccagaa
tcattctacttcttacttagtgtagaaaaattcagacataatataaataaccttaaatat
atagttattgatgagattcatgaactggtttcagataaacgaggagcagaactatcctta
gcactagaacgcgttgctaggttatatactaaggctaggctccagcttataggtctttca
gccactgtgagtaatccatacctagttgctaagttaatcatgggtgaaagatatgtcagg
ataattgaggctgagaagacgaaaaaacgttatagtatactagttacagcaccgggagat
agctctaagaatagcaataatgacactaacagcgtacgttctagagttcataatgaaacg
ttgacacgagtaaatctaatcaagaatatccttgcaaagagtcgaggaaacgtgatagtg
tttgtaaacactcgtgatactgcagaggttctaggtgcattactaaaacaagttgtgggt
gacgagtttatagaggtgcatcatggaagccttagccgtgataaacgtgtagacgctgag
cagaagcttaagagcggtaagataaaagcacttgtagctacgtcgagtcttgaacttggt
atcgatataggtagtattgatcttgttatacaatacatgtcgcctaggcaagttgtgaag
cttgtccagcgggtaggtcgtgcaggacatagagcgggcagtgtttccagaggagtaata
gtagcgtctaacaacatatttgatatattggaatctgcagttatagcggctagagctatg
aggggtaacttggagaatataccactctacaacaaaccttatgatgcccttattcatcaa
gtggctggtatgattatagagtctggtgaaattgatgtaaataaactttacaatgttata
acaagcagtggttattatagagatcttagcatagatgagttatatcagatattatactat
atggatagctctcggatagccagagcaaaggagtcaagagtgtcaatagggtctatgagt
aagagctactactttagtgttactatgataccggatactaggcagtataatgtttacgag
gtagctagcggcaagaaactcggtgttctcgatgaggagtttgtagcaactctagagaag
gaggacaagttcgtactaggtggacgtgtctgggaggtagtagatatcagtgaagatcat
gtgagagtgaaacccgctagagaggaccgtctaatacctccggcatgggagggtgaccta
atccccgtagaatatggagttgcgcgagaacttggtagcatcttgcgacgttacgaagaa
attggtgaaagagtattagacaattatccgctagatgataatgcgagaagaataattgta
gacagaataactagacatatatcaaaaggtttgccgctaccgacagataaaagaatagta
atagagcactatggggatacattcattatatatagtttcctcggtagccgtggtaataag
gctcttgaatatttactatctgcctacatatctgagattaaaggttactcgccagtaact
acgagtacaccatacattgtggctgttaggctggcatctcatgaaaggcctagttttata
gctgattcgttgatgaaacttgccagctttacacgtgaggatgtagataatctactacgt
aaggctatctatagaagtcggctctatcagtggattttactctatgttgctctccgtgca
ggcgctgtgaaaagaactagagagactaatttgaaacagataaaaactattattctaaaa
ttgaaagatactatacttggtgaggaggcgtataaggagataaacgtaagaaaagtagac
atcaatgctctatattcattccttgaaaggattagaaacaaaaaagttgaagtaagaaca
gttagtctaaggatcacatcccctataacagaagatgctgtagcagaggcaagatttggt
gatcgtgtctctgttgatagtttaccctccacaatactagtcgaagcgattaagagaaag
ttgtcgtcgaaagaggtaatcttcttgtgtgtaatgtgtggaaaaacatggtcaagaaga
ctatcacatctcagcgataaaatagaatgtccgcgttgtggcgcccgaatgatctatcca
gcactatcaagggaacgtatagaggttgccaaaattgttcttgagaagataaaacataac
agtaggctctctaatagtgaaaagaagctttcgcgtgaggtaatggatgcagctggatta
gtattaaactacggtaagaaagctatagaagctttagtatcaacgggggtaggtgttcat
acagcgaaacgtgttttacagaagctggtatttggagaagaagcattttatcgtgcactc
gtggaagctgaggtgaaatatcataaatataagcacaggttagagaagtaa

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