Pyrodictium delaneyi: Pyrde_1135
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Entry
Pyrde_1135 CDS
T04114
Name
(GenBank) ATPase involved in DNA repair
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pdl
Pyrodictium delaneyi
Brite
KEGG Orthology (KO) [BR:
pdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdl03400
]
Pyrde_1135
DNA repair and recombination proteins [BR:
pdl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pyrde_1135
Archaeal homologous recombinant proteins
Pyrde_1135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
Rad50_zn_hook
AAA_13
AAA_21
AAA_15
AAA_29
SbcC_Walker_B
ABC_tran
AAA_27
GAS
Med9
Nuf2_DHR10-like
Baculo_PEP_C
AAA_22
AAA_16
CTU2
DUF1664
CENP-F_leu_zip
Laminin_II
DUF6011
Motif
Other DBs
NCBI-ProteinID:
ALL01183
UniProt:
A0A0P0N4B4
LinkDB
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Position
complement(1115287..1118037)
Genome browser
AA seq
916 aa
AA seq
DB search
MIIERVELENVLSHRRTRIDFGRGIIAIVGPNGAGKTSIIDAITYALFGSHSRGTRSRKD
ALIRLGSSIARISVEFTANGHKYRLQKTIQRNGATQALLYLIDGGTAKLMARGVESVKAE
LKRIIGIDPLLADLLLVTRQGEIDEILVDRDRRIDVMNTILRLRAIEKAYERLAVIIRML
RRDKENKEELYRTEEARLREAEESAREYERIVKELEKLRPALEKAENEYSRLQEQAIELR
RLKQRFDFLRAKREELARELNRLEREYEEARREYEIALNAKEELKELERLEKDLQLIEEA
VNLVNEIRREKQHLESFASRMERIKEELRDFPEAERKANEYERLRSLLDELEQDSRQYHQ
VKSQLEQLEARAKLLRAKAEAETSRLLERLRTSIPLDFPREPHKIIEKLESMLASLERTI
DTTRAKLENVHGQVEAKRSEIRDLEDKLMKLTEAQGRCPLCGRPLSDEHRVELISKIRAQ
KKRLEAELRRLESQETLLRNELRDLESRKRLIERLARDAQGAAKRIELMLREAEDAEQQK
QRLQQQYLELFAKYKEYEEAKQRLRELEAWVSKYQKLRARMDEYKSLESETTRLKAEISK
REQKLKEILDSIKLSIEELEEASKRISYYREYIAGVKSEAARLPRAEAKLRELEAEIDRV
RSELESIDSELEEMGDVDTALEQTEVELREREQELRELRDRVARLEGMREKLEAMAAKTE
LLRSRVSQLREELKRYQEALQALEKIRRALGPDGVPRIIRQAVRNILEYHLRDTLMKFNI
DFLDVRLEDDYSVVLVTREGEKTVSMLSGGERIALAIAYRLALARVVGERIESMIMDEPT
IHLDEEKRRELVEIIKYGLEASGLLQLIVVTHDREIEDAADKVIEVTKVDGASIVRIRSP
GDETTSIRAEYGLAAH
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
gtgataatagagcgcgtggaattggagaacgtgttgagccataggaggacaaggatagac
tttggccgcggaataatagctatagttggccccaatggggccggcaagacaagcatcata
gatgctataacttatgcattattcggctcccacagccgcggcactcgtagccgtaaggac
gcgcttatacggctaggctcgtctattgcacgtatcagtgtagagttcacagcaaacggg
cacaagtatcgcctacagaagaccatccagcgcaatggagcaacccaagccctcctatac
ctcatagacgggggaacagccaagctcatggcgcgtggcgtcgagagtgtaaaagctgag
cttaagagaattatcgggatagacccgctcctagctgacttactgcttgtgacaaggcag
ggcgagatagacgaaatactcgtagaccgggatagacgcatagacgtcatgaatactatc
ctacgactacgagccatagagaaagcctatgagcgcctggcggttataattaggatgctg
cgtagagacaaggagaacaaggaggaactataccgcactgaggaagcacgccttcgtgaa
gctgaagaaagtgcccgtgagtacgagaggatagttaaggagctggagaaactgaggcct
gctctcgagaaggccgagaacgagtatagccgtctacaagagcaggccattgagctacgg
agactaaaacagcgtttcgactttctaagagcaaaaagggaagagctagcaagggagctc
aataggttagaacgcgaatatgaggaggccaggagagaatatgaaatagcacttaacgcg
aaggaggagctgaaggaacttgagagactcgagaaggatctacaactcatagaggaagct
gtaaacctcgtaaacgagattagacgggagaagcaacacctggagtcctttgcatcaaga
atggagagaattaaggaggagctgcgagactttccagaggctgaacgcaaggcaaatgag
tatgagaggctcagatcacttctcgatgagctagagcaagacagcaggcagtatcaccaa
gttaagtctcagctagaacaactagaggctcgagcaaagcttcttagagcgaaggccgag
gctgagactagtagactactcgagaggcttaggacaagtatacctctggacttcccccgt
gaaccacacaagattatcgagaagcttgaatcaatgctcgctagcctagagaggaccata
gatactaccagggcgaagctcgagaacgtacatggacaagttgaggctaagcgatcagag
atacgtgaccttgaagacaagcttatgaagcttacagaggctcaggggagatgccctcta
tgcggtagaccgctaagtgatgagcatcgtgtggagcttatctctaagatacgtgcccag
aagaagcggctagaagctgagctaaggaggctagagagtcaggaaaccctgctgcgtaac
gagcttagggatctagagtcgcgaaaacggctaatagagcggctcgcaagggatgcccag
ggagccgctaagagaatagagttaatgcttcgagaggccgaggacgctgaacaacagaag
cagaggctccagcaacagtatctcgagcttttcgcgaagtataaggagtacgaggaggca
aaacagagactacgcgagctggaagcatgggtaagtaagtaccaaaaactccgggcacgg
atggatgaatacaagtctctcgaatcggagaccactagactcaaggccgagattagcaag
cgcgagcaaaaactcaaggagatacttgatagtattaagcttagcattgaagagctcgag
gaggcctctaagcggataagctactacagagaatacattgccggcgtgaagagcgaggct
gctagactcccccgggctgaggcaaagttacgcgagctagaggctgagattgatagggtc
cggagcgagctggagagtatagactccgagctagaggagatgggcgatgtagatactgct
ctagagcagacagaggtcgaacttagagagcgtgaacaagagcttagagagctccgggat
agagtcgcgcggctagagggtatgagggagaaacttgaagccatggcagcgaagactgag
cttctacggagccgggtatcacagctacgagaggaactcaaacggtaccaggaggcgctt
caagccctggagaagatacgtcgtgcactaggccctgacggtgtaccacggataattagg
caggctgtgcgcaatattctcgagtaccatctacgggatacactgatgaagttcaatatt
gacttccttgatgtaaggcttgaagatgattatagcgttgtactagtgacgcgtgagggc
gagaagactgtgtctatgctcagcggcggtgagcgcatagcacttgccatagcttatagg
cttgcgcttgcccgagtcgtcggagagcgcatagagtccatgataatggatgagcctacc
atacatcttgacgaggagaagcgacgcgaactagtagagattatcaagtatggattggag
gctagcggtctgttacaactgatagttgtgacccacgacagggagatagaagatgctgcc
gacaaagtaatagaggttacgaaggttgacggtgctagcattgtgagaatacgttctcca
ggcgacgagaccaccagcatccgagccgaatacggattagccgcgcattag
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