Pyrodictium delaneyi: Pyrde_1650
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Entry
Pyrde_1650 CDS
T04114
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pdl
Pyrodictium delaneyi
Brite
KEGG Orthology (KO) [BR:
pdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdl03032
]
Pyrde_1650
03400 DNA repair and recombination proteins [BR:
pdl03400
]
Pyrde_1650
Enzymes [BR:
pdl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Pyrde_1650
DNA replication proteins [BR:
pdl03032
]
Prokaryotic type
DNA Topoisomerases
Pyrde_1650
DNA repair and recombination proteins [BR:
pdl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Pyrde_1650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
MAP65_ASE1
DUF4364
Motif
Other DBs
NCBI-ProteinID:
ALL01693
UniProt:
A0A0P0N5E2
LinkDB
All DBs
Position
complement(1652227..1654308)
Genome browser
AA seq
693 aa
AA seq
DB search
MPVKRRTVWRARTQRGCNIGYGYVLVVAEKPKAARKIAEALSNSKPRLCRFGKVPYWIVS
WQGRTYVVASAAGHLFGLTTDERGFPVFNYYWAPLWHIDASASYTKPFFETLEALGRKAS
AFINACDYDIEGSVIGYMIIKHLGGVNRAYRAKFSALTRQDIQHAFRRLSPLDWDMIEAG
LARHELDWIWGINVSRALMESLYSVTGRRIVLSAGRVQSPTLIEAVARDREVNLFVPIPS
FAVNVSISIGGFTYTGRIAVYDTRREAKLAAERLKKLRFLKVTSYREWKEKVPPPYPFNL
GDLQAEAAKYFGYSPMFTQKIAEQLYLDGLISYPRTNSQKIPDTVDVVSIVKGLQRMAEY
RQLTSYVLRAASGLPRPRNGPKDDPAHPAIHPTGEVPTEPLTGARKKIFDLIVRRFLASM
APAAIIAHARARLTASNIGSLELAGLYIQEPGWLNIYHFAMPQESRIPRLRVGEKIEIKR
VSVRVVYNNPPEPYTKASLVRWMERVGIGTEATRARIVEILFERKYLSLKGRKVEVTELG
HAVAEILAKYFPQLTSIELTRYFEEKLESIRNKKSTRLEVIKEAKTLLRTILTNFKSTAM
RDVGIELAKALNIVTPDKHCIVCWREPLENNLCRFHLEALEKLQAAFNEWRKRDDIDCIE
FLRKVSRLKSTGRWIREVSEYFAKKGKCPFTSV
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgaaaagacgtactgtctggagggctagaacacagagaggctgtaatatagga
tatgggtacgtgctcgttgtagccgagaagcctaaggctgcccgcaagatagcagaggct
ctctcaaatagcaagccaagactctgcagatttgggaaagtgccatattggattgtctca
tggcaaggacgtacatacgttgtggcctccgcggccggccacctatttgggctgactacc
gatgagaggggttttcctgtattcaactattattgggctcctctatggcatatagatgct
agcgcctcgtatactaaacccttcttcgagacgctagaggctctgggccgcaaggcttcc
gccttcattaacgcatgtgactatgatatagagggcagcgtaatcggttacatgattatc
aagcatcttggcggagtcaatagagcctatagggctaaatttagtgcgctaacacggcag
gacatacagcacgcctttagacgtctaagtcccctagattgggacatgatagaagccgga
cttgccagacacgagcttgactggatatggggcattaacgttagcagagcactcatggag
tcattatactctgttacaggtaggcgtatagtattgagtgctggtagagtccaatctccc
acactcatagaggctgttgcacgtgaccgagaagtcaacctatttgttcctataccgagt
tttgctgtcaacgtttctataagtattggtggatttacctatactggacgtatagccgtc
tacgatacacgtcgagaagcaaaactcgctgcagagagattgaagaagctacgttttctt
aaggttacatcataccgtgaatggaaggagaaagtacctccgccatatcctttcaacctc
ggcgaccttcaagccgaggccgccaagtactttggctacagcccaatgtttacacagaaa
atcgccgagcaattatatctagacgggctgattagttatccacggactaatagccaaaag
atccccgacactgtagacgttgtatccatagttaaggggctacagaggatggccgaatac
agacaactgacaagctacgtactaagggctgcaagtggattgccgcgtccacgcaacggt
cctaaagatgatccagcgcaccctgccatacatcccaccggcgaggttccaacagagcct
cttactggtgcacggaagaagatatttgatctcatcgtccggcggtttctagcctctatg
gcacccgcagccataatagctcatgcacgtgccagacttacagcatccaacataggctct
ctcgaacttgcaggactatacatacaagaacctggctggcttaatatataccattttgcc
atgccccaggagagtcgtataccacggcttcgtgtcggcgagaaaatagagatcaagcgt
gtatctgtaagagtggtctataacaatcctccagaaccctatactaaggcttctcttgtg
agatggatggagcgtgttggcataggcactgaggctaccagagctaggatagtcgaaatt
ctattcgagcgcaaatatttgagcctaaaaggcaggaaagtagaggtaacggagctaggt
catgccgtagcggagatattagcaaagtatttccctcagcttacgagcatagagttgacg
cgctatttcgaggaaaagctcgaatccattagaaacaaaaagtccacccgcttggaagtc
ataaaggaggccaagactttactaagaactatacttaccaacttcaagtcgacagcaatg
agggatgttggcatagaattagccaaagctcttaacatcgtgacgccggataagcattgt
attgtatgctggcgtgaaccacttgaaaacaacttatgccgtttccacttagaggcatta
gagaagttacaagcagcctttaacgaatggcgcaaacgcgacgacatagactgtattgaa
ttcctgcgtaaagtctcacggcttaaatctaccgggcgatggatacgcgaggtctccgag
tattttgccaagaaaggtaagtgtccttttacctctgtgtaa
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