Pyrodictium delaneyi: Pyrde_1686
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Entry
Pyrde_1686 CDS
T04114
Name
(GenBank) tRNA splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
pdl
Pyrodictium delaneyi
Brite
KEGG Orthology (KO) [BR:
pdl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdl03016
]
Pyrde_1686
Enzymes [BR:
pdl01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Pyrde_1686
Transfer RNA biogenesis [BR:
pdl03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Pyrde_1686
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Treslin_N
Motif
Other DBs
NCBI-ProteinID:
ALL01729
UniProt:
A0A0N7JDB5
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All DBs
Position
complement(1693395..1693934)
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AA seq
179 aa
AA seq
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MTIELKIVDEKTLELVIVKGIDEALKHLPYASIHRLHPLEALYLLYNGVATVIGHDGKNY
TFEDLIKKYSRLNPYAWVEFEVYLDLRKRGRLPVPGPRPHSILLRRRKREPKYTHYILVL
EENRPVKLVTLYSFVEEAAKNGWEPLLAIVDRYGDITYYTASIFRPGLTRLPREGGTEP
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
ttgacaatagagttgaagatagttgacgaaaagaccttggaacttgtgatagtaaaaggc
atagatgaagcgctgaaacatttaccatatgcaagtatacataggcttcatcctctcgag
gctctatacctgctgtacaacggcgtagctacagtcataggccacgatggcaagaattac
acgtttgaagacttgattaaaaaatacagccggctaaacccctatgcctgggttgagttt
gaggtataccttgacctacgaaagcgtggtaggcttccagttcctgggccaaggcctcat
tccattctactaagacgtagaaagagagaaccaaagtatacacattacatactggtactt
gaagagaatagacctgtaaagcttgtaacactatactccttcgtggaggaggcagcaaag
aacggctgggaaccgcttttggccatagttgaccgatacggtgacataacatattataca
gcttcaatcttcagaccgggtttaacaaggctaccaagagagggtggtacagagccttga
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