Pyrodictium delaneyi: Pyrde_1872
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Entry
Pyrde_1872 CDS
T04114
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pdl
Pyrodictium delaneyi
Pathway
pdl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pdl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Pyrde_1872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdl03019
]
Pyrde_1872
03009 Ribosome biogenesis [BR:
pdl03009
]
Pyrde_1872
04131 Membrane trafficking [BR:
pdl04131
]
Pyrde_1872
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdl04147
]
Pyrde_1872
Messenger RNA biogenesis [BR:
pdl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Pyrde_1872
Ribosome biogenesis [BR:
pdl03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Pyrde_1872
Membrane trafficking [BR:
pdl04131
]
SNARE
SNARE associated proteins
Others
Pyrde_1872
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Pyrde_1872
Exosome [BR:
pdl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Pyrde_1872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
AAA_5
AAA_14
AAA_22
TIP49
AAA_33
AAA_lid_PRS2_C
Vps4_C
nSTAND3
AAA_24
AAA_28
IstB_IS21
RNA_helicase
Mg_chelatase
DUF815
AAA_18
Sigma54_activat
ATPase_2
ABC_tran
NPHP3_N
TsaE
AAA_7
AAA_17
Parvo_NS1
ATPase
NB-ARC
AAA_3
NACHT
PhoH
Bac_DnaA
UFD1_N2
HEPN_SAV_6107
Motif
Other DBs
NCBI-ProteinID:
ALL01915
UniProt:
A0A0P0N635
LinkDB
All DBs
Position
1873545..1875755
Genome browser
AA seq
736 aa
AA seq
DB search
MVVTSSRRRKEVVLRVVEAKQRDVGKGKVRIDVDILKMIGAEPGDVVEIEGRKKTAAVAW
PSYPEDRGQDIIRMDGLLRKNAGVSIGDKVIVRKADVQPASVVKLAPANFSITIDSGFVN
YVKKKLIEYPVVEGDTVLIPVLNQSIPFVVVQTKPQGVVVISHDTNIILLEKPVEQGKIP
RVTYEDIGGMKDIIQKVRELIELPLKHPEIFKRLGIEPPKGVLLYGPPGVGKTLLAKAIA
NETNAYFIAINGPEIMSKYYGESEQRLREIFEEAKKHAPSIIFIDEIDAIAPKRDEVVGE
VERRVVAQLLALMDGLESRGDVIVIAATNRPNAIDPALRRPGRFDREIEIPLPDKQGRLE
ILQIHTRNMPLAEDVDLERLAELTRGYTGADLAALVREAAMHALRRYLPRIDLSQDRIPP
EILEEMEIRMEDFMAALREIVPSGLREIYIEVPEVHWDDIGGLEEAKQQLREAVEWPLKN
PDVFRRMGITPPKGILLFGPPGTGKTLLAKAAATESGANFIAVRGPEVLSKWVGESEKMI
REIFRKARQHSPAIIFFDEIDAIAQTRGFYDTSGVTYRIVNQLLAELDGIVPLSNVVVIA
ATNRPDILDPALLRPGRFDKIIYVPPPDTRARLEILRIHTRKMPLAEDVDLELLAMRTEG
YSGADLAALVREAALLALREDINATKVHMRHFMKALEVIRPSITQDMVKFYEEWYQQARQ
QLPGSKLLQAKPTMFT
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgactagttctcggcgaagaaaggaggtagtcctgagggtcgtagaggctaaa
cagcgcgacgtcggtaagggcaaggtaaggatagacgtagacatattgaagatgataggt
gcagaacccggcgacgtagtagagattgaagggcgcaagaagacggcagcagtcgcatgg
cctagttacccggaggacagaggccaggatattatacggatggatggtctgctccgtaag
aatgcaggcgtgagtatcggtgataaggttattgtgcgtaaggctgatgtgcagccggct
tccgtagtcaagcttgcaccagctaacttctctataaccattgatagtggtttcgtgaac
tatgtgaagaagaagcttatagagtaccctgtggttgagggagatactgtcctcataccc
gtgcttaaccagtctatacccttcgtagttgttcagaccaagccacaaggagtagttgta
attagccatgataccaacatcatactgttagagaagcccgtagagcagggcaagataccg
agggtaacatacgaagacataggcgggatgaaggatattatacaaaaggtccgcgagctc
atagagctacccctcaaacacccagagatattcaagaggctgggcatcgagccgccgaag
ggtgtgctcctctacggcccgcccggcgtaggtaagactctcctcgcaaaggctattgct
aacgagacaaacgcctacttcatagctattaatggcccggagattatgagcaagtattat
ggcgagagcgagcagaggctaagagagatattcgaggaggccaagaagcacgcgccaagc
atcatattcatagacgagatagacgcgatagcgcccaagcgcgacgaggtagtaggtgag
gtcgagcgccgtgtagtagcacagctcctagcccttatggacggtcttgagagccgtgga
gacgtcatagtgatagctgctacgaacaggcctaatgctatcgaccctgccctgcgccgc
ccaggccgcttcgaccgcgagatagagataccactacccgacaagcagggcaggctcgag
atactacagatacataccaggaacatgccactagccgaggacgttgacctcgaaaggctg
gctgagttaacccgtggttacactggtgcagacctagcagcactagtacgcgaagcagct
atgcacgcgctgcgccgctacctgccgcggatagaccttagccaggaccggataccccca
gagatcctcgaggaaatggagatacggatggaggacttcatggcggcgctacgcgagata
gtgccaagcggcctacgagagatctacatcgaggtcccggaggtccactgggacgacata
ggcggtcttgaggaggctaagcagcagctccgcgaggccgtcgagtggccactaaagaac
cccgacgtgttccgccgcatgggaataacaccgcctaagggtatcctgctctttggcccg
cctggcaccggtaagacgctgctagccaaggctgctgccacggagagcggagccaacttc
atcgcggtacgcggccccgaggtgctaagcaaatgggtaggcgaaagcgagaaaatgata
cgcgagatattcaggaaagcaaggcagcacagtccagcaataatattcttcgacgagata
gacgcaatagcgcagacgaggggcttctacgatactagtggtgtgacgtaccgtatagtc
aaccagcttctagcagaactagacggcatagtaccgttgagcaatgtggtcgtgatagct
gctacgaataggccagacatactcgacccagcgctactccggccgggccgctttgacaaa
ataatctacgtgccaccgcccgatactcgtgcaaggctagagatactccgaatacacact
cgtaaaatgcctctagcagaggatgtagaccttgaactgcttgctatgcgcactgaaggc
tacagtggtgctgatctagcagcattggtgcgtgaagccgcgctgctagcactacgcgag
gacataaacgccacaaaagtgcatatgagacacttcatgaaggcactagaagtaataaga
ccatcgataacacaagatatggtaaagttctatgaggaatggtatcagcaagcacgtcaa
caattgccgggcagtaagctgctccaagcaaaaccaactatgttcacataa
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