Pediococcus damnosus: ADU72_0375
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Entry
ADU72_0375 CDS
T04321
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pdm
Pediococcus damnosus
Brite
KEGG Orthology (KO) [BR:
pdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdm03009
]
ADU72_0375
Enzymes [BR:
pdm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
ADU72_0375
Ribosome biogenesis [BR:
pdm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ADU72_0375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_15
MTS
Cons_hypoth95
PrmA
TRM5-TYW2_MTfase
Methyltransf_25
Methyltransf_11
Methyltransf_4
UPF0020
RrnaAD
DOT1
Methyltransf_23
N6_Mtase
TPMT
Methyltransf_12
Methyltransf_32
CMAS
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
AMV66324
UniProt:
A0A143AR86
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Position
complement(226495..227865)
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AA seq
456 aa
AA seq
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MKFRAPVSKNETYDVTIMDLTYQGMGVAKIDSFPIFVANSLPGEEIVMKVTKVAKTYAFG
RVEEWKSKSPNRVEIKDAQYTQTGIAPLQHLAYPAQLEFKQHQIQELFYKVHLNSIEVSP
TVGMDKPYGYRNKAQIPVRRVNGQLTTGFYRRNSHELVPIENFYIQDPEIDKAIIVVRDI
LRKYHTEPYNETNHTGVIKTIMVRRGHYSHEMMIVLITRAKKIPMNFEIVEEIRKQLPEV
KSIVQNINAAQTNVLMGKEEKLLWGSGVIHDTLLGLTFAISADSFYQVNPVQTEKLYDLA
IKKAGLTGKETVIDAYCGIGTISLAMAQHAKTVYGVEVVDKAIQDAKINAKLNKIHNVKF
FTGKAEDQMDQWQHDGLEPDVIVVDPPRKGLAPEFITAATAMQPKRFVYVSCNPSTLVRD
VQIFMDNGYHVDQPVVPVDQFPQTPHVESVTVLVKD
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttagagcaccagtttcaaaaaatgaaacgtatgacgtcacgattatggattta
acttatcaaggaatgggagtcgcaaaaattgatagttttccaatttttgttgctaacagt
ttacctggtgaagaaattgtgatgaaagttacaaaagttgccaaaacatatgcgtttgga
cgggttgaagaatggaaatccaagagccctaatcgggttgaaattaaggatgcccagtat
acgcagacaggaattgcacctttacaacatttagcttacccagcacaattggaattcaag
caacatcaaattcaggaattattctataaagtccatcttaattcgattgaagtgagtcca
acagttggaatggataaaccttatggatatcggaataaggcgcagattcctgttcgccga
gttaacggtcaattgacaaccggtttttatcgtcggaatagccatgagttagttccgatt
gaaaacttctatattcaggaccctgaaattgataaggcaattattgtggtcagagatatt
ttacgtaaatatcatactgaaccatataatgaaaccaatcataccggcgttatcaaaaca
attatggttcgtcgtggtcattattcacacgaaatgatgattgtgttgatcacccgggca
aagaaaattccaatgaacttcgagattgtggaagaaattcgcaaacaattaccagaagtt
aagagtatcgttcaaaatattaatgcggcacaaactaacgtcttaatgggtaaagaagaa
aaacttctctggggcagcggtgttattcatgatacattgctggggctaacctttgccatt
tccgctgattcattctatcaggtaaacccagtgcaaaccgaaaagctttatgaccttgcc
attaaaaaggctggtttgacagggaaagaaactgtcattgatgcgtactgtggaattgga
accatttcgttagcgatggctcagcatgcgaaaactgtttatggtgttgaagtcgtggac
aaagcaatccaagatgctaagattaatgccaaattaaacaagattcataatgtgaaattc
tttacaggtaaggctgaagaccagatggaccaatggcaacatgatggcttagaaccagat
gttatcgtggttgatccgcctcgaaagggtttggcacctgagttcattaccgcagctact
gcaatgcagccaaaacggtttgtgtacgtcagttgtaatccatcaaccttagtccgggat
gtacaaatctttatggataatgggtaccacgtagatcaaccagttgttccagttgatcaa
ttcccacagacgccccatgtggaaagtgtcacagtgttagtaaaagactaa
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