Pediococcus damnosus: ADU72_0393
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Entry
ADU72_0393 CDS
T04321
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pdm
Pediococcus damnosus
Brite
KEGG Orthology (KO) [BR:
pdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdm03016
]
ADU72_0393
Enzymes [BR:
pdm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
ADU72_0393
Transfer RNA biogenesis [BR:
pdm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ADU72_0393
Prokaryotic type
ADU72_0393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AMV66342
UniProt:
A0A0R2HE79
LinkDB
All DBs
Position
complement(245987..246754)
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AA seq
255 aa
AA seq
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MYRYKITIAYDGTNFAGFQKQPKQRTIQETLERAVNKIAKKPAKLIKVYGSGRTDAGVHA
LGQVVHFDIPFSLSDNAMLHALNSLLPLDIEVLNARQISSEFHAQYSTQGKRYRYRLALG
EFIDPFKRNYTGHWKLSLDLKAIQAALPDLIGEHDFTSFCAAGGHTKTNIREIYEATAVY
DKIQNEIIFEFYGSGFLYNMVRIMVAVLTEIGSGKRPEHDILRLFKVKDRNQARGTAPAS
GLYLKKVYYPEKFSK
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgttataaaattacaattgcctacgatggaactaattttgcaggttttcaaaaa
caacccaagcagcgtactattcaagaaactttagagcgagctgtgaataaaattgccaaa
aagccagccaaattaattaaggtgtatggatcaggacgtacagatgccggtgtccatgcg
ctaggacaggtagttcactttgatattcctttttccctatcagataatgctatgttgcat
gctttaaatagtcttttgccattagatattgaagtcttgaatgcccggcagatatcgtct
gaatttcatgcgcaatatagtacccaaggaaaacggtatcgctatcggcttgctttaggc
gagtttatcgatccttttaaacgtaattatacgggccactggaagctttcgttggatttg
aaggctattcaggcagctttacctgatttgattggagaacacgattttacaagcttctgt
gcggctggtggtcatactaaaacaaacattcgtgaaatttatgaagcaacggcggtttat
gataaaattcaaaatgagattatttttgaattttatgggagtggctttctttataatatg
gtgcgcatcatggtggccgtcttaactgaaattggcagtggtaaacgtccggaacatgat
attttgcgtttgtttaaggtaaaagatcgcaatcaagcacgtggaacagcaccagcaagt
ggtctttatttaaaaaaagtgtattatccagagaaatttagcaaatga
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