Pediococcus damnosus: ADU72_0538
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Entry
ADU72_0538 CDS
T04321
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pdm
Pediococcus damnosus
Pathway
pdm03420
Nucleotide excision repair
pdm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ADU72_0538
03430 Mismatch repair
ADU72_0538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdm03400
]
ADU72_0538
Enzymes [BR:
pdm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ADU72_0538
DNA repair and recombination proteins [BR:
pdm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ADU72_0538
MMR (mismatch excision repair)
Other MMR factors
ADU72_0538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C_2
UvrD-helicase
Viral_helicase1
AAA_19
UvrD_C
AAA_30
SLFN-g3_helicase
DEAD
AAA_14
AAA_16
NPHP3_N
NACHT
Motif
Other DBs
NCBI-ProteinID:
AMV66483
UniProt:
A0A0R2HKD0
LinkDB
All DBs
Position
complement(380199..382493)
Genome browser
AA seq
764 aa
AA seq
DB search
MTDSIQKYEQKHLDGVITKVQEAIAKSSKDAKKAETDSKSIDKNFSNEVRINTSTYSGMM
DTAISVRQQQQLLSERQNSWQHASQQLNVLKRLEKRPYFARIDFHEAGEKSDETIYIGLG
SFSDTPDHFLIYDWRAPISSVYYDGELGNVSYETPDGTQEVDVKLKRQFTIEDGKIVTVF
DTNETIGDQMLLKALGNSSDTKMKSIVSTIQKEQNKIIRDTHSDLLFVQGAAGSGKTAAI
LQRVAYLLYRYRGNLTASQVIMFSPNQIFNDYVDQVLPELGEHNMVQMTYYQFTKRRIPN
MEVETLQQRFESRTDSVSKKIRTLENSLVYFDAVTKYAEHLGSADMKFRNLMFHDKPFAS
QEKIQGIYYGYNENYRLGNRLDATKEALLKSLNSRIGSEVRSKWAEQAVQSLNHEDLEKL
YGGEPKEFDDSDKEFKFLARKLVIQALQPVRNAIVHNRFLNINAQYVHFLRSVPHLINLE
KAGLTQADWQTYVEEVVASLKNHAISLNNTSAYLYLYDLIVGKKDERDMRYVFIDEIQDY
TAFQLAYLKYNYPRAKFTLLGDLNQSIYSNESTSTLLAELSTMFDKEKTRVIQLEKSYRS
TQQITDFTKEILKNGEAIEAFHREGDLPVVSVKPSFDLAVKRVQAQMSQNQKDGESTAII
GKSVAECQKITEGLRNQGERVTLIKTENQRLAEGVVVVPSYLAKGLEFDAVIVWDASDAM
YHDEDERQLLYTICSRAMHRLTIVATEKMSRLLDRIDSSLYKLD
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgacagattcaattcaaaagtatgaacaaaagcatctcgatggtgtgatcaccaaggtt
caagaggcaattgcaaaatccagtaaagacgctaaaaaagcagaaacagactctaaatct
attgataagaatttttcaaatgaagttcgtataaatacaagcacatattctggaatgatg
gatacggcgatttcggtccgtcagcagcaacaattactatcagagcgtcaaaatagttgg
caacacgcaagtcaacaattaaacgtcttaaaacgacttgaaaaacggccttattttgcg
cgcattgattttcatgaggccggtgaaaaaagtgacgagactatctatattgggctcgga
tcattttcagatacgccagatcattttctgatttatgattggcgggcaccaatttcaagc
gtttattatgatggcgaattaggaaatgtttcctacgaaacgcccgatggcacacaagaa
gttgacgtaaagcttaaacgtcaatttaccattgaagacggcaaaatcgtcacggtgttt
gatacgaatgaaaccattggcgatcaaatgctgcttaaggcacttggaaactcttctgat
actaagatgaagagtattgtttcaaccattcaaaaagaacaaaacaagattattcgggat
acgcattcggatcttttgtttgtgcaaggagctgccggatctggtaaaacggccgcaatt
ttgcagcgagtggcctatcttttgtatcgttatcggggaaatttaacggctagtcaagta
atcatgttttcgccaaaccaaatttttaatgattacgtcgatcaagtgttacccgaactt
ggcgaacataacatggttcaaatgacctactatcaatttaccaaacgtcgcattcctaat
atggaagtcgaaacgttgcaacaacgttttgagagtcggacagattcagtttccaaaaag
attcgaaccttagaaaatagtttggtttattttgatgctgtgactaaatatgctgaacat
ctcggctcggctgatatgaagttccgtaatttgatgttccatgacaagccatttgccagt
caggaaaaaattcaaggaatctattacggttataatgaaaactatcgtttggggaatcgg
ttggatgcgacgaaagaagcgttgctaaaatcgttgaattcacgaattggtagtgaagtt
cgctctaaatgggccgaacaagctgttcaatcgttgaaccatgaagatcttgagaaactt
tacggtggtgaacctaaagagtttgatgatagtgacaaagaatttaaatttttggcacgt
aaactggttattcaagctctgcaacctgtaagaaacgcgattgtgcataatcggttccta
aacatcaatgcacagtatgtccactttttaagaagtgtgccacatttgattaatttggag
aaggctggtttaacacaggctgattggcagacctatgtggaagaggttgtcgccagtttg
aagaaccatgcgatctctttgaataatacttctgcctacctgtacctctatgatttaatt
gttgggaaaaaggacgaacgggatatgcgctatgtctttattgatgaaattcaagattac
acagcctttcaattagcttacctaaagtacaattatccacgcgctaagtttactttattg
ggtgatttgaatcagtccatttatagtaacgaaagtacctctacgttgttggctgagtta
tccactatgtttgataaagagaagacgcgagttattcaacttgaaaaatcttatcgatct
acacagcaaattaccgattttacaaaagaaattttgaaaaatggtgaggcgattgaggcc
tttcatcgagaaggcgacttgccagttgtcagcgtgaaacctagttttgatttggctgtc
aaacgcgtccaagcgcaaatgtcccaaaatcaaaaagatggcgaatctacggcaatcatt
ggtaaatctgtggccgagtgtcaaaagattaccgagggcctgcgtaaccagggcgaacgc
gtgacgttaattaaaacagagaaccaacggcttgccgaaggggttgtggttgttccttca
tacttggccaagggacttgaatttgatgctgtgattgtctgggatgcttccgatgctatg
tatcacgatgaagatgaacgtcagttactttatacaatttgttcgcgagccatgcaccgg
ttgacaattgttgcgactgaaaaaatgtcacgcttgttggatcggattgattcaagtttg
tataaactggattaa
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integrated database retrieval system
