Pediococcus damnosus: ADU72_0589
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Entry
ADU72_0589 CDS
T04321
Name
(GenBank) Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
pdm
Pediococcus damnosus
Pathway
pdm01501
beta-Lactam resistance
pdm02010
ABC transporters
pdm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pdm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ADU72_0589
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ADU72_0589
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ADU72_0589
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdm02000
]
ADU72_0589
Transporters [BR:
pdm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
ADU72_0589
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SBP_bac_3
YlmH_RBD
LPAM_2
Motif
Other DBs
NCBI-ProteinID:
AMV66534
UniProt:
A0A0R2HJ37
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All DBs
Position
complement(428681..430309)
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AA seq
542 aa
AA seq
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MNVRSAVKVGAVALASTLVLAACGSKNSSSSKKTVNFEESAEISTMDQSKVTDVVGFTQL
GNTQEGLYRLGKKSKVTNALATNTKESKDGKTWTFTLRKNAKWSNGDPVTAKDFVYGWQR
TVNPKTASEYAYLFSGIKNADKISSGKVNYKQLGVKADGKYKLVVTLDRPIAYFKLLMGF
PTFYPQNQKAVEKYGSKYGTASDKLVYDGPYKQVGWTGTNLNWKLEKNNNYWDKKNVKMD
TINYQVVKDASTGLNLYNSKKLDVANITGNQVAQYKNNKDYVLRKQSSMFYLQYNMKKEK
VFRNAKIRKAISMSINRNQLTGKVLADGSTNPKGLVSSGLASNPKTGTDFATEAEVKPAV
TQNLTEAKKLMAEGLKEEGKSNLTFTLLGDDTASTKQITEFLQSQIEKLPNVKVNLQNVP
FKTRLSDSSDGKFDVVLSAWGADFSDPISFLQLFVSGNAQNNGGFSNKQYDALIKASNTT
DATNPEKRWDDMVQAEKILMNDQGIAPVFQQAQSQLWSSKLKGVVYNTAGVNFDYKGLYL
TK
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttagatcagcagtaaaggttggagccgtcgcgctagcttcaacattagttttg
gctgcctgtggatccaaaaacagcagttcgtcgaaaaaaacagttaactttgaagaaagt
gctgaaatttcgacaatggatcaatcgaaggttaccgatgtagttggatttacacagtta
ggaaatacccaagaaggtctttaccgactaggtaaaaagagcaaggttactaatgctctt
gcaaccaacacgaaggaatctaaagatggtaagacttggacctttacacttcgtaagaat
gctaagtggagtaatggcgatcctgttaccgcaaaagattttgtttatggttggcaacgg
acagtaaatcctaagacagcttctgaatacgcatacttgttctccggaattaagaatgcc
gacaagatctcgtctggtaaagtgaactacaagcagttaggcgttaaggctgacggcaag
tataaattagttgttacgctagatcgaccaattgcctacttcaagctattgatgggcttc
ccaacattctatccacagaatcaaaaagctgttgaaaagtatggttctaagtacggaaca
gcttctgataaattagtttacgatggtccatacaaacaagttggttggactggcacaaac
ttaaattggaaacttgagaaaaataataattattgggataaaaagaatgtgaagatggat
accattaattatcaggttgtcaaagatgcaagtactggtttgaacttgtataatagtaaa
aaacttgatgttgccaacattactggtaaccaagttgcccaatacaagaacaacaaggat
tacgttttacggaaacaatcatcaatgttctatcttcaatataatatgaagaaagaaaaa
gtattccgtaacgctaagattcgaaaagctatctcaatgtcaatcaaccgaaaccaatta
actggtaaagttcttgccgatggttcaaccaatccaaagggactcgtttcatctggttta
gcaagcaatcctaagactggtacagactttgcaactgaagctgaagttaagcctgctgtt
acacaaaacttgacggaagctaagaagttaatggctgaaggacttaaagaagaaggcaaa
tcaaacttaacatttacacttcttggtgatgatacagcttcaacaaagcaaatcactgaa
ttcttacagtcacaaattgaaaagctaccaaatgtgaaggtcaacttgcaaaacgtacca
tttaagacacgtttgtcagattcatcagatggtaagttcgatgttgttctttctgcatgg
ggcgccgacttctctgatccaatttcattcttacaattatttgtaagcggaaatgctcag
aataatggtggattcagcaataagcagtatgatgcattaatcaaggcttctaatacaact
gatgctacaaatcctgaaaaacgttgggacgatatggtacaagctgaaaagattttgatg
aatgaccaaggaattgcacctgtcttccagcaagcacaatcacaactttggagttctaag
ttgaagggtgttgtttataacactgctggtgtcaactttgactataaaggtttgtattta
acaaaataa
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