Pediococcus damnosus: ADU72_1163
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Entry
ADU72_1163 CDS
T04321
Name
(GenBank) GTPase and tRNA-U34 5-formylation enzyme TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
pdm
Pediococcus damnosus
Brite
KEGG Orthology (KO) [BR:
pdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdm03016
]
ADU72_1163
Transfer RNA biogenesis [BR:
pdm03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
ADU72_1163
Prokaryotic type
Methyltransferases
ADU72_1163
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
GTP_EFTU
RsgA_GTPase
AIG1
MMR_HSR1_Xtn
Ras
Roc
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AMV67096
UniProt:
A0A0R2HFH9
LinkDB
All DBs
Position
1066718..1068109
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AA seq
463 aa
AA seq
DB search
MQETATELDTIAAISTPPGEGGISIVRLSGNEALEVASRVFKGKDLHKVNSHTINYGHIV
NPKTNEKIDEVMVSVMLAPKTYTREDVIEINCHGGIVPTNDILQLVLSNGARMAKPGEFT
ERAFLNGRVDLSQAEAVMDLIRAKTDRSMKVALNQLDGDLSHLIKNLRQDILDVLAKVEV
NIDYPEYDDVETMTSKLLREKAVEVRAQIKQLLQTAQEGKILRDGLATAIVGHPNVGKSS
LLNRMLHEDKAIVTDVAGTTRDVLEEYVNVRGVPLKLVDTAGIRDTNDKVEKIGVERSRK
AIQTADLVLLVLDSSHPLSKDDRQLIEVTNDAKRIIILNKTDLPLQLDMDELLKLVPEDQ
IIRTAATKGVGLDDLKDKITKLFFGGIESNQNSVIVTNARHIGLLNKAEDALDSVLQGLD
DGMPVDLVQIDMTQCWELLGEITGDSYQDELLDQLFSQFCLGK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagacagcaaccgaattagataccattgccgcaatttcaacaccacctggtgaa
ggaggtatttccatagttagattgagtggtaatgaggctttagaagtagcttcacgtgtt
tttaagggcaaagatcttcataaggtaaatagtcatacgatcaattatggtcatattgtt
aatccaaaaactaatgaaaagattgatgaagtgatggtttctgtgatgttagctcctaaa
acatacacgcgagaagatgtcattgaaataaattgtcatggtggaattgtgcctactaat
gatattcttcaactggtcttgagtaatggtgctcggatggcaaaaccaggagaatttacg
gaacgggcctttttaaatggtcgggtggatctttctcaggcagaagcagttatggatctg
attcgagcaaaaacggatcgctctatgaaggtggctttaaatcagcttgatggtgattta
tcacatttaattaaaaacttacgtcaagatattttggatgtattggcaaaagttgaagtt
aatattgattatcctgagtatgacgatgttgaaaccatgactagtaaattattacgcgaa
aaggcagttgaagttagagctcaaatcaaacaattgttgcaaacggctcaagaaggtaaa
attcttcgtgatgggttagcaacggcgattgttggtcatcctaacgttggtaaatctagt
ttactgaatcgaatgcttcatgaggataaagcgattgtgacggatgtcgcaggaaccaca
cgtgatgttttggaagagtacgtgaatgtgcgtggcgtgccgttaaaattggttgatact
gcaggaattcgggataccaacgataaggttgaaaaaatcggcgttgaacgaagtcggaag
gcaattcaaacggccgatttagtattgcttgtcttggatagcagtcaccccttatctaaa
gatgaccggcagttaattgaagttacaaatgatgccaaacggattattattctcaataaa
actgatctacctttacaattagatatggatgagttattgaagttagtgccagaagatcaa
attattcgaactgcagctactaagggtgtcggtttggatgatttgaaggataaaatcaca
aaattattctttggtggcatcgaaagtaatcaaaatagtgtcatcgtaactaatgcgcgt
cacattggactactaaataaggcggaagatgcactcgactctgttcttcagggattagat
gatgggatgcctgttgatttagttcagattgatatgactcaatgctgggaacttctcggc
gaaattacgggagacagttatcaagatgaattattagatcaattatttagtcaattttgt
ttaggtaagtaa
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