Pediococcus damnosus: ADU72_1190
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Entry
ADU72_1190 CDS
T04321
Name
(GenBank) ATP-dependent nuclease, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pdm
Pediococcus damnosus
Brite
KEGG Orthology (KO) [BR:
pdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdm03400
]
ADU72_1190
Enzymes [BR:
pdm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ADU72_1190
DNA repair and recombination proteins [BR:
pdm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ADU72_1190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
DUF3369
Motif
Other DBs
NCBI-ProteinID:
AMV67123
UniProt:
A0A0R2HVU3
LinkDB
All DBs
Position
1102688..1106284
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AA seq
1198 aa
AA seq
DB search
MTLKFILGKASRDGQGAMIDQVDQVLSENSQNRVYYIVPNHVKFQSELTVLNELRKRHSQ
NSHTYAQNQLQVFSFSRLAWYFMKNEPIYQVPRLSKAGVAMLIDRIILEHQDELTVFNGE
QTQPGFIQQLASQFDELQKGRISAEDLVNLTDEVNSNENSTVDLTAKMHDLSIIYTAFEE
EMLGNYVDSNTLIQALCEYLATQDLSQMVFFFDSFSSLSAQEMKLVQVLIENAKAVVVGL
VLDRPYYDKLPEPENLFYESGKTYFKLYQFAQAKHLQVQTDTYAKKSRVISDLVKLEDFW
IKATNLEPTEVTTLSDQNAIQIFRADSRQTEVEQIARKIRQAVANNPQIHYRDFSILTRH
LDTYATVLNPTFDEYEIPYFNDLQISMKDHPFVALIEALFAVKDHYYRYQDVMRLLKTEL
LIPTVDEQPMPIEAFRRAKDLTENLVLKNGYEGGRWLQKEDWQYLRFNSTDFGTQTDQDL
AITKQINLIKNYIRRVLPPFFKALDNAKTGKEGVTVLYKFLIDQGVADRLKQWRDEAVDR
GDLSKAAQPEQTWQTFCDMLDEYVAILGDREFTIDNFSALLKAGFEGASYSLIPSTLDQV
MISETGMAQMGDRKYTFIMGATDAVMPEQFNNQGILTDDDCDKLQDDLKEDQFFASNNNQ
QAHFERYLNYAAFLSGCKGLILSYASSDGEGAEQKISPYVKEIKTHFQITDSQVLKYFDR
PKVDEESVVDFLGSKRSTLTHLLQVSRDSKSIKKMVKPNWQYIYRVLNNDPQLGELTKRV
FESLTYKNEPVKLYPEIVQGLYGDTINTSISKLEEFYQNEYAYFLKYGLKLQERNVFELS
PASTGEYFHMALDHFVKLIGQQNLEINQLSDSELDNLLNEVVKTIKTEPQFEILGSSNRM
HYINDQLNQTIKQMLKIFVLQSDNSKMRPVQTEVLFGHVGSEAGLHSLDFEVAPTKKVHV
RGKIDRIDELNLTSENGQSQKYFGIVDYKSSDHDFNFRDIYYGLAMQMLTYIDALKQNIN
LIDQDKDSPLISGALYMHLQNPAVNVNKLRNTDSDTVQKELLKQTKYKGIILSDPDLLDN
LDTKLDSGSSLIYPFKKNKAGKYSSYDNHIVTQEELTRLIKHAERKIVEASKKIFAGELK
LNPARWPDTHTALQYSPYKSIMQFDEMLPENNYHKLENLSGKDVLAKLKEEDDEHGEK
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgacattaaaatttattctgggtaaagccagccgggatggacaaggcgcgatgattgac
caagtggatcaagtgttaagtgaaaattcgcaaaaccgtgtctattatatcgtacccaat
cacgttaaatttcaatcagaattaacagtcctaaatgaattacgcaaacggcatagtcaa
aatagtcatacttatgctcagaatcagttgcaagtcttttcgttttcacgattagcttgg
tattttatgaaaaatgagccaatttatcaggtccctcgtctatcaaaagcgggcgtagcg
atgttaatcgatcgaattattttagaacatcaagatgaattaactgtgtttaatggtgag
cagacgcagcccggatttattcagcaacttgctagtcaatttgatgaacttcaaaagggc
cgaatatcggcagaagatttggtgaatctgactgatgaagttaatagtaatgaaaattct
actgttgatttaactgccaagatgcacgatctatcgattatttatactgcttttgaagaa
gaaatgcttggaaattatgtagatagtaatacgttaatacaagccttgtgcgaatattta
gctactcaggatttaagtcaaatggtgtttttctttgacagtttttcttcattatcagct
caagagatgaaattagttcaagttttaattgaaaatgccaaggccgttgttgtaggactg
gtcttggatcgtccttattatgacaaattgcccgaaccagagaacttgttttatgaatct
ggtaaaacctatttcaaactttatcaatttgcgcaggcaaagcatttacaagtacaaacg
gatacgtatgctaaaaaatctcgggtaatctctgatttagttaaattagaggatttttgg
ataaaggccacaaatttagaaccaaccgaggtcacaactttatctgatcaaaacgcgatt
cagatttttcgagcagatagtcggcaaactgaggtggaacaaattgcgcgtaagataagg
caggccgtggctaataatccccaaattcattatcgtgatttttcgattttgacgcgtcat
ttggatacatatgccacagttttgaatccaacttttgatgaatatgaaattccttatttt
aatgatttacaaatttcaatgaaagatcatccatttgtggccctaattgaggcactgttt
gcggttaaagatcattattatcgttatcaagatgtcatgcgcttattaaaaactgagctg
ctgataccaaccgtagatgagcagccaatgccaattgaagcatttagacgggccaaagat
ttaactgaaaatttggttttgaaaaatggatacgagggtggtcgctggcttcaaaaggaa
gactggcaatacctacgttttaattcaactgattttggaactcaaactgatcaagatttg
gcaattacgaaacaaattaatttgattaagaactatattcgtcgcgtattacccccattt
ttcaaagctttagataatgcgaaaactggtaaagaaggggtcacggttttatacaaattt
ttgattgaccagggcgttgccgatcgactcaaacaatggcgtgatgaggcggttgataga
ggtgatttatcaaaagcagctcaaccagaacagacttggcaaactttttgcgatatgttg
gacgagtatgtggccattttaggtgatcgtgaatttacaattgataacttttcagcacta
ctgaaggcaggctttgagggtgcttcttattccttaattccatcgactttagatcaagtc
atgatttcggaaacaggaatggcacaaatgggtgatcgtaagtacaccttcattatggga
gccaccgatgcggtgatgccggagcaatttaataaccagggaattttaactgatgacgat
tgcgacaaattacaagatgacttaaaagaggatcagttttttgccagcaacaacaaccaa
caagctcattttgaacgttatttgaactatgcggcgtttctgtcaggttgcaaagggcta
attctgtcgtatgccagcagtgatggtgaaggcgctgaacagaaaatttctccctatgta
aaagaaattaaaacgcatttccaaattacggattcacaagtcttaaagtactttgatcgg
ccaaaagttgacgaagaatcggtagttgattttttgggttcgaaacgaagtacattaact
catttattgcaggtaagtcgtgatagtaaaagtattaaaaaaatggttaagccaaattgg
cagtacatttaccgtgttttaaacaacgatccgcaattaggtgagctaaccaagcgtgta
tttgaaagtttgacttataaaaatgagcctgtgaaactgtatccagaaattgttcaggga
ctatatggcgacacgattaatacttcaatatcaaagcttgaagagttttatcaaaatgag
tatgcctatttcttgaaatatggccttaagctgcaagaaaggaatgtctttgaactttca
ccagcaagcacgggagaatactttcatatggcattagatcactttgtgaagctaattggc
cagcaaaatctggaaattaatcagttatcagattcagagttggataatcttttaaatgaa
gtagtcaagacaattaaaacggaaccccagtttgaaatcttgggtagctcaaatcgaatg
cactatatcaatgaccaattaaaccaaacgatcaaacaaatgctgaaaattttcgtttta
caaagtgataattctaaaatgcggccagttcaaacagaagtattatttggtcatgtaggt
tcagaggcaggattgcattctcttgacttcgaggtggcaccaactaaaaaagttcatgtg
cgtggcaaaatcgatcggatcgatgaacttaatttaacttcagaaaatggtcaatcacag
aaatactttgggattgttgattataaatccagtgatcatgactttaactttagagatatt
tactatggtctggcaatgcagatgctaacgtatatagacgccttaaaacaaaatattaac
ctaattgatcaggataaggattcaccactgatctcaggggcattatatatgcacctgcaa
aaccctgccgttaatgtaaacaaattgcgtaatacggattcagataccgttcaaaaggaa
cttttaaagcaaactaaatataaagggattatcctaagtgatccagatttactggataat
ttagatacgaaactagattctggtagttctttaatttatcccttcaagaaaaataaagcc
gggaaatattcgtcttatgataatcatattgtgacacaagaggaattgacaaggttaatt
aagcatgctgaacgaaagattgtggaagctagtaagaaaatctttgcgggcgagttgaag
ttaaacccagctcgttggccagatacacatacggctctgcaatactcaccatataagtca
attatgcagtttgatgagatgttgcctgaaaataattatcataaacttgagaatttgagc
ggtaaagatgttttggcgaaactgaaggaagaggatgatgagcatggggaaaagtag
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integrated database retrieval system
