Pediococcus damnosus: ADU72_1636
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Entry
ADU72_1636 CDS
T04321
Name
(GenBank) Hypothetical ATP-binding protein UPF0042, contains P-loop
KO
K06958
RNase adapter protein RapZ
Organism
pdm
Pediococcus damnosus
Brite
KEGG Orthology (KO) [BR:
pdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdm03019
]
ADU72_1636
Messenger RNA biogenesis [BR:
pdm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ADU72_1636
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_22
AAA_18
AAA_28
nSTAND_NTPase5
Myosin_head
DUF2380
AAA_30
nSTAND3
NB-ARC
FkbH_N
Motif
Other DBs
NCBI-ProteinID:
AMV67561
UniProt:
A0A0R2HKH2
LinkDB
All DBs
Position
1598830..1599723
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AA seq
297 aa
AA seq
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MADEKMQLVIITGMSGAGKTVAMQSFEDLGFFCVDNMPPALLPKFWELVKESGKISKVAL
VVDLRSRAFYDQILHMLTDEESETAAIDSQILFLDTSDKELISRYKETRRSHPLAMERRV
VDGVRKERELLAPIRTNAEYVIDTTTMTPRELREQIFESFGTDGATGKFHIEVVSFGFKY
GLPIDADIVMDVRFLPNPYYVPELKNKSGLDDAVYKYVMDQPVTEKFYKHFISLLKYVMP
GYQKEGKSTVTIAIGCTGGQHRSVAIAKRVAEDLDKDYTVHIQHRDMNKRKETVNRS
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgaaaaaatgcaactagtcattataaccggaatgagtggtgctggtaaaaca
gttgctatgcaaagctttgaagatcttggctttttttgtgtagataatatgccaccagcg
cttttacctaaattttgggagttagtgaaagaatcagggaaaatcagtaaggtggcgtta
gttgtcgacttgcgatcacgtgcattttatgaccaaattttgcacatgcttacagatgaa
gaatcagagacagctgcaattgactcacaaattttgtttctggacacctcggataaagag
ttaatctcacgatataaggaaacccgtcgttcacatccattagcaatggaaaggcgcgtg
gttgatggggtccgcaaagaacgggaattattagcgccaattcgtacgaatgccgaatat
gtcattgatacaacgaccatgacaccacgtgaattgcgagagcaaatttttgaaagcttt
gggactgatggggcaaccggtaaatttcatatcgaagttgtttcctttggatttaaatat
ggactgccaattgatgccgatattgtcatggatgtccggtttttacccaatccatattat
gtacccgaattaaaaaataagtctggcttagacgacgcggtatacaaatacgttatggat
cagccagttactgaaaaattctataaacattttatttcattattaaaatatgtaatgcca
ggttatcaaaaagagggtaaatcaacagtgacgattgcgatcggttgtacaggtgggcaa
catcgttcggtagccattgcaaagcgtgttgctgaggacctagataaagactatacagtt
catattcaacatcgtgacatgaacaaacggaaggaaactgtgaatcgatcatga
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