Pediococcus damnosus: ADU72_1909
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Entry
ADU72_1909 CDS
T04321
Name
(GenBank) 3'->5' exoribonuclease Bsu YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
pdm
Pediococcus damnosus
Brite
KEGG Orthology (KO) [BR:
pdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdm03019
]
ADU72_1909
Messenger RNA biogenesis [BR:
pdm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ADU72_1909
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
CDC73_C
Motif
Other DBs
NCBI-ProteinID:
AMV67830
UniProt:
A0A0R2HMI4
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Position
1901991..1902950
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AA seq
319 aa
AA seq
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MENKKLFDYVVDETLNIFVLIKSAEVRVAKNGKDFLSMVFEDRSGDISGKFWDASSKDIQ
NFEAGKVIFLNGKRENYKGSPQIKILGIRLATETEPNNPNLYTKKAPMSEADMREEVSKL
LFDITNPNWNRVVRYLLQKYDKQFYTYPAAKTNHHAFQGGLAYHTISILRLAKQVSNQYP
QIDRSLLYAGSILHDLGKTVELSGPVSTTYTVEGNLLGHIVIMDGEIVKACQELKISDSS
EDILLLRHMIVSHHGLKEYGSPIEPLLLEAVVLHALDDLDASIQMVTGALDHTKGGTFSE
RLFAMNGRNFYKRLDHKTE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaaaagctttttgattatgttgttgatgaaactttaaacatttttgttttg
atcaagagtgcagaggttcgtgttgccaagaatggaaaagattttctttcaatggttttt
gaagatcgttctggagatatcagtggtaagttctgggatgcaagttcaaaagatattcaa
aattttgaagctggaaaagtgattttcctaaatggaaaacgagagaactataagggatca
ccccaaattaagattttgggaatccgattggcgacggaaacagagcctaataatcctaat
ttgtatactaaaaaagcacctatgagtgaagcagatatgagagaagaagttagcaaacta
ctttttgatatcactaatcctaattggaacagagtggtacgctatttacttcaaaaatat
gataaacaattttacacgtatcctgctgcgaagactaatcatcatgcgtttcaaggcggt
ttagcctatcacacaatttcgattctgcggttggctaagcaggttagtaatcagtatccg
caaattgatagatcattgctttacgctgggtctatcttgcatgacttggggaaaacagtt
gaattatctgggccagtttctacaacctatacagttgaaggtaacttattggggcacatc
gtaattatggatggcgaaattgtaaaagcttgtcaagagcttaaaattagtgatagtagt
gaggatatcttattattacgacatatgattgtttctcatcatggattaaaagaatatgga
tcaccaattgagccattactacttgaagctgttgttttgcatgcgttagatgatttagat
gcttcaattcaaatggtaacgggtgctttagaccatacaaagggtggtactttttctgaa
agattatttgctatgaatgggcgaaatttctataaaagattagatcataaaactgaatag
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