Pediococcus damnosus: ADU72_2021
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Entry
ADU72_2021 CDS
T04321
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pdm
Pediococcus damnosus
Brite
KEGG Orthology (KO) [BR:
pdm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ADU72_2021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdm03019
]
ADU72_2021
03009 Ribosome biogenesis [BR:
pdm03009
]
ADU72_2021
03036 Chromosome and associated proteins [BR:
pdm03036
]
ADU72_2021
Enzymes [BR:
pdm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
ADU72_2021
Messenger RNA biogenesis [BR:
pdm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ADU72_2021
Ribosome biogenesis [BR:
pdm03009
]
Eukaryotic type
90S particles
RNase
ADU72_2021
Prokaryotic type
rRNA processing factors
ADU72_2021
Chromosome and associated proteins [BR:
pdm03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
ADU72_2021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Dicer_dsRBD
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AMV67942
UniProt:
A0A143ADC9
LinkDB
All DBs
Position
2009554..2010255
Genome browser
AA seq
233 aa
AA seq
DB search
MKKSIDAELKKNFQIEFNDESLLDEALTQASYVNEHPNQGLKFYERIEFLGDAVLQLIVS
EYIFKRYPEMPQGKLTRLRAAMVCETSFSQFARECHFDQYIRLGKGEEKGGARNRSSLLC
DIFESFVGALYLDQGRPAVEKFVHTVIFPKLDTGAFDHVIDYKTNLQEVLQRDGDALIHY
DLLNEAGPDNELDFEVAVFDDKRKLGVGTGKSKKIAEQAAAKDALQALRVKNV
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatcaatcgatgcggaactaaagaaaaattttcaaattgaatttaatgatgag
agtcttttggatgaagcactaactcaagcttcgtatgtaaatgagcatcctaatcaagga
ttgaaattttatgaacgaatcgagtttttaggtgatgcagttttgcaattaattgtgtca
gaatatatttttaaacgttatccagaaatgccacaaggaaaattaactcgcctcagagcg
gcaatggtttgtgaaacaagcttcagtcagtttgctcgggaatgccattttgatcaatac
atccgtcttggtaagggtgaggaaaagggtggcgcacgcaaccgttcttcacttctttgt
gatatttttgaatcatttgttggggctttatatcttgatcaagggcgaccagcagttgag
aaatttgtgcatacggttatattccctaagttagacactggagcatttgaccatgtgatt
gattacaagaccaacttgcaagaggtgctgcaacgcgatggggatgccttaattcattat
gatcttttaaatgaggctggccctgataatgagcttgattttgaagtggccgtttttgat
gataaacgaaaacttggggttggcactggaaaatcaaagaaaattgcggaacaagctgct
gcaaaggatgctttacaagcattacgcgtcaaaaatgtttag
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