Pediococcus damnosus: ADU72_2069
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Entry
ADU72_2069 CDS
T04321
Name
(GenBank) DinG family ATP-dependent helicase YoaA
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pdm
Pediococcus damnosus
Pathway
pdm03030
DNA replication
pdm03430
Mismatch repair
pdm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ADU72_2069
03430 Mismatch repair
ADU72_2069
03440 Homologous recombination
ADU72_2069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdm03032
]
ADU72_2069
03400 DNA repair and recombination proteins [BR:
pdm03400
]
ADU72_2069
Enzymes [BR:
pdm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ADU72_2069
DNA replication proteins [BR:
pdm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ADU72_2069
DNA repair and recombination proteins [BR:
pdm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ADU72_2069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_B_exo1
BRCT
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
AMV67990
UniProt:
A0A0R2GY17
LinkDB
All DBs
Position
2067002..2068006
Genome browser
AA seq
334 aa
AA seq
DB search
MASYEEVYAKLVKDSQIKAYLAETNMTVKAKKEFLMYVIVQTLKRGSVVRAASTDFPQDY
VVIDIESTGLDKNTDEVIQLSGIKYHNDKQIEQFDTLVHPKQQVSGFISNLTGISSQMLE
NTPEFHEVASNYRAFIGNYPIIGHNIISFDIPFLEEKGMTFSDNRLIDTFQLAKVKKLPT
EKFSLPILKKYFDVHNRSHNSLNDCKTTAVVYQHLATDDLASELVKKHHKSIFEHQKVTV
YGTFEGKSNSDMQQLVIKYGGQVMCKLDQEVDVFIDGESLNNSADAELSAEEKKAYRISK
KYNHLKIINGEEMIKKLGKLESEPWQQVGNEATG
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcaagttatgaagaagtatatgcaaaactggttaaggattcgcaaattaaagcctat
ctggctgaaacaaacatgacggtgaaagcaaaaaaagagtttttgatgtatgtaattgtt
cagacacttaaacgtggtagtgttgttagagcagcaagtactgattttccacaggattat
gtggtgattgatattgaatcaactggattagacaagaatacagatgaagtgattcaactt
agtggtattaaatatcataatgataaacagatcgaacaatttgatacgctagtgcatccc
aaacagcaggttagtggttttattagcaatcttactgggatctcttcacaaatgttagaa
aatactcctgaatttcatgaggtggcatctaattatcgcgcctttattggtaattatcca
attattggacataacattatttcttttgatataccattcttggaagaaaaggggatgact
tttagtgataatcgactcatagatacttttcaacttgcaaaagtcaaaaagctaccaacc
gaaaaatttagtttaccgattcttaaaaagtatttcgacgttcataatcgttcccataat
tctttaaatgattgtaagacgacggcggttgtttaccagcacttggctacggatgattta
gcatctgaattagtaaaaaagcatcataaaagtatttttgaacatcaaaaggtgactgtt
tatggaacttttgaaggaaaatcaaattctgacatgcaacaattggtgatcaagtacggt
ggacaggtgatgtgtaaattagatcaggaagttgatgtttttattgatggggagagccta
aataatagtgcggacgctgagcttagtgcagaagagaaaaaagcctataggatctccaaa
aaatataatcatttaaaaattattaatggtgaagagatgattaaaaaacttggaaaactg
gaatctgaaccgtggcaacaggttggaaatgaagctacgggttaa
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