Pediococcus damnosus: ADU72_2164
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Entry
ADU72_2164 CDS
T04321
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pdm
Pediococcus damnosus
Pathway
pdm03030
DNA replication
pdm03430
Mismatch repair
pdm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ADU72_2164
03430 Mismatch repair
ADU72_2164
03440 Homologous recombination
ADU72_2164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdm03032
]
ADU72_2164
03400 DNA repair and recombination proteins [BR:
pdm03400
]
ADU72_2164
Enzymes [BR:
pdm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ADU72_2164
DNA replication proteins [BR:
pdm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ADU72_2164
DNA repair and recombination proteins [BR:
pdm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ADU72_2164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
SSB
Motif
Other DBs
NCBI-ProteinID:
AMV68085
UniProt:
A0A0R2HV77
LinkDB
All DBs
Position
complement(2167098..2170457)
Genome browser
AA seq
1119 aa
AA seq
DB search
MAFVPLQVMSSFSLLQSTTRITELAKEAKKRGFEALALTDNNIMYGLVDFYNACKKEGIK
PILGLKLDLFGSIDSDNHFPILLLAKDQTGYRHLMKISTIKNTQPTDTNLYYKQIAEFLT
NLIVIFPAKGSELVTLVERGDPSAAQQLIKQIQAQTDENSVLVGVNAQQSTVLQNTLQQI
AQTTHASAVVVPEVNYLNSTDHFATQVLRDIDKGETIRNPEQFENYQGDNWLRPEKDYEA
IYKENNLTSAMEMTVAVADQCNVTLNFKKPELPAFTVPDGLDSKAYLTQLTQKGLEKRLK
NQNVDKASYQKRLGHELSVIDQMGFDDYFLIVWDVMDFAHHHEITTGPGRGSAAGSLVAY
TLQITDVDPLQYDLLFERFLNPERSQMPDIDLDIPDNKRDEILKYVHDKYGHNHVSQIIT
FGTLAAKQALRDVGRVFGMAPYEINDLSKLVPNVLKITLKEAVKESQKLQNWIADSSKNK
LLFEIAQQIEGLPRHYSTHAAGVVLSAQNLSDVVPLQSGSDELLLTQYPKDTVEALGLLK
MDFLGLRNLSIMANAIKIIQKNGKPDFKISDVKLDDPKTLTLFQNADTTGVFQFESSGIR
NVLQQLHPETFELVAAVDALYRPGPMENIETFIKRKKGLEPVQHLDPSLEPILKGTYGIL
VYQEQVMQVASVMGGFSLGEADLLRRAMSKKKRTVIDDMKTKFISGASHKGYSKDTAIQV
YDYIEKFANYGFNKSHAVAYSKLAFELAFLKAHYPAAFFAALLNSVINNPSQIKRYLMEA
RQHGVKVLAPNVNLSQAYFILKDGQIIFGLACIKGARRDFITDVLQERKQNGPFKDLQAF
LQRIPTKWLKQDLMESLIYAGAFDSFGYNRAELLQVLPDLLNGVALSGSSMSLFEKLTPK
IVRKPDLSLEEKLQKENEILGAYLSGHPVEQYNQLRTKFKITNIIDLAVNQSVTCLIYMT
KMRVIRTKRGTQMAFITGSDLTGEIDITVFPEQYQQATDMLKKGKVLLIQGKVDERNGLQ
VVANHIQLASQLSIKQPKQRWVLRFNESDDITTKEQQLRTILQTNPGPVPVLLFYPFNDK
KVLLEKRFWASNSEKTNSALTSLLGKENVVLQSIKSTDI
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgtacctttacaagtaatgagcagttttagtttgttacaaagtacaaccaga
attactgagcttgccaaagaggccaaaaagcgcggatttgaagcgctggctctaacagat
aataatattatgtacggcttagttgatttctataatgcttgcaaaaaagaaggcattaaa
ccaattttaggattgaaactggatttgtttgggagcatcgattctgacaaccattttcca
attttattattggctaaagatcaaactggttatcgccatctgatgaaaattagtacaatt
aaaaatacgcaaccaaccgatactaatctgtactataaacaaatcgctgaatttttaact
aatttaatcgttattttccctgcaaaaggttcagaactcgtcaccctagtcgagcgcggt
gatccgtcagctgctcaacaattaatcaaacaaattcaggctcaaaccgatgaaaatagc
gttttagtcggcgttaatgctcagcaatcgactgttttacaaaatacccttcaacaaatc
gcccaaactacccatgcaagtgcagtggttgtgcccgaggttaattatttaaattctacc
gatcattttgccacgcaggttcttagggatatcgataaaggtgagacaatcagaaatcct
gaacagtttgaaaattatcagggtgataactggctacgtccagaaaaagattacgaggcc
atctacaaagaaaacaatttaacttccgcaatggaaatgaccgtggctgtggctgaccaa
tgtaatgtgactctaaactttaaaaagcctgaattacctgcattcacagttcctgatggt
ttagactccaaagcctatttaacccaattaactcaaaaagggttagaaaaacgtttgaaa
aatcaaaatgttgataaagcaagctatcagaaacgattaggtcatgaattatcagttatt
gatcagatgggctttgacgattatttcttgattgtttgggatgtaatggattttgctcat
catcatgaaattacgactggacccggaagaggctcagcggctggatcacttgtggcttat
actctgcagattacagatgttgatcctctccagtatgatttattatttgaacgttttcta
aatcctgagcgttcacaaatgccggatattgatcttgatattcccgataacaaacgggat
gaaatcctgaaatatgtgcacgataagtatggtcataatcatgtttcacaaatcattact
ttcggaacgctggctgctaaacaggcattacgtgatgtgggccgggtttttggcatggca
ccttatgaaattaatgatttgagtaaactagttccaaatgttttgaaaattacattaaaa
gaagccgtaaaagaatcacagaaattgcaaaactggattgctgatagttcaaaaaacaaa
ttattatttgaaattgcccaacaaattgaggggcttccacgtcattattcaacccatgct
gccggagttgttttaagtgcccaaaacttaagcgacgttgttccattacaatctggtagt
gatgaattattactcacccaatatccaaaagatacggttgaagcgcttggtcttctaaaa
atggatttcttgggtttgcgaaatttaagcattatggcaaatgccattaaaattattcaa
aaaaatggtaagcctgattttaaaatttcagatgtaaagttggatgatcctaaaacatta
actctttttcaaaatgcggacacaactggtgttttccagtttgagtctagcggaattcgt
aatgttttacagcaattacatccagaaacttttgaattagttgctgccgtggatgcacta
taccgtccaggtccaatggaaaatattgaaacatttattaaacgaaaaaagggacttgaa
ccagttcagcatctagatcccagtttagaaccaattttaaagggcacatacggaattctt
gtgtaccaagaacaagttatgcaagtagcctccgtaatgggtggattttcacttggggaa
gccgatctgttacggcgagccatgagcaaaaagaaacgaacagttattgatgatatgaaa
accaagtttatttcaggagcaagtcataaaggatactcaaaagataccgccattcaggtt
tatgattatattgagaaatttgctaattatggttttaataaatcacatgcggttgcttat
tctaagttagcatttgaattggcttttttgaaagcacattatccagctgctttttttgcg
gccttactcaattcagttattaataatccaagccaaattaaacgttatttgatggaagct
agacaacacggcgtaaaagttcttgcacctaatgttaacctgagtcaggcttactttatt
ctaaaagatggtcaaattatttttggcttagcctgtataaagggagcacgacgtgatttc
atcactgatgtccttcaagaacgcaaacaaaatggtcctttcaaagatttacaggcattt
ttgcaacgaattccgaccaaatggttaaaacaggatttaatggaatccttgatttatgca
ggagcgtttgattcttttggatataaccgagccgaattattacaagtcctaccagatttg
ctaaacggtgtagctttaagtggtagtagtatgagtttgtttgaaaaattaactccaaag
attgtaagaaagcctgatttatctttggaagaaaaacttcaaaaagaaaacgaaatttta
ggtgcttatctttctggtcatccagttgaacaatataatcagttgcgaacaaagttcaaa
attacaaatattattgatttggcagttaatcaatccgtaacttgtttaatttatatgact
aaaatgcgcgttattcgcacaaaacgtggtactcaaatggcttttataaccggtagtgat
ttgacaggagaaattgacattacagttttccctgagcaatatcagcaagcaaccgacatg
cttaaaaagggaaaagttctgcttattcaaggaaaagttgatgagcgtaatgggttacaa
gttgttgctaatcacattcaacttgccagccagttatcgataaaacaacctaaacaacgc
tgggttttacgttttaatgaatccgacgacatcacaactaaagagcaacaattaagaaca
attctgcaaaccaatccgggtccagttcctgtgttacttttttatccatttaacgataaa
aaggttttgttggaaaaacggttttgggcttcaaattctgaaaaaactaattcagcgctt
acaagcttgttgggtaaagagaatgtcgttttgcaatcaatcaaaagtaccgatatctag
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