Pediococcus damnosus: ADU72_2204
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Entry
ADU72_2204 CDS
T04321
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pdm
Pediococcus damnosus
Brite
KEGG Orthology (KO) [BR:
pdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdm03016
]
ADU72_2204
Enzymes [BR:
pdm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ADU72_2204
Transfer RNA biogenesis [BR:
pdm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ADU72_2204
Prokaryotic type
ADU72_2204
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AMV68125
UniProt:
A0A0R2HR53
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All DBs
Position
complement(2214422..2215339)
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AA seq
305 aa
AA seq
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MNGIVPLYKPRGMTSFDCVAKIRGILHQKKVGHSGTLDPNVDGVLPICVGKATKVVPYLM
ASGKVYEGAVTLGFSTTTEDVDGEIVDQLALRQAFSNVEIDRAMQSFVGEITQIPPMYSA
IKINGKKLYEYARQGIEVERPARKITIKSFERCGETTFNSQNNTQTINFKVACSKGTYVR
TLAVDLGKKLEVPAVMSRLTRTESGNFQIEDTVTFAQLEEAVENKIVENLLVPLDHALKK
YPHFALNDDLWTRVQNGAVLKRSNFNQSQSAEPVLVLTYDDRVQALYQYDQERAAYRPLT
MFLTK
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaattgttcctttgtataaaccacgtggcatgacaagttttgattgtgttgcc
aaaattcgtggcattttgcatcaaaaaaaggttggtcatagtggaactttggatccaaat
gtagatggtgttttgccaatctgtgtaggtaaagctaccaaagtggtgccatacttaatg
gcttctggcaaagtttatgaaggagctgtaaccttagggttctccacaactactgaagat
gttgatggtgaaattgttgatcaacttgctttaaggcaggcattttcaaacgttgaaatt
gatagagctatgcaaagctttgtcggcgaaattacacaaattccgccaatgtattcggcc
attaaaattaacggaaaaaaattatatgaatatgcacgtcaagggattgaagtagaaaga
ccagcacgaaaaataaccatcaaatcttttgaacgttgcggtgagactacttttaattca
caaaataatacacaaaccataaactttaaagtggcgtgcagtaaggggacttatgtgcgg
accttagcagttgatttggggaaaaagcttgaggttccagctgtcatgtctcggttaact
cgaacggaaagtggtaattttcagattgaagacactgtcacctttgcgcaattagaagag
gctgttgaaaataagattgtcgagaatttattagttccgttagatcacgcattgaaaaaa
tatcctcactttgcgttaaatgatgatttatggaccagggtccaaaatggagcggtttta
aaacgaagcaacttcaaccagtcgcaatcagcagaaccggtccttgttttaacttacgat
gatcgtgttcaagcattatatcaatatgatcaagaaagggcagcatatcgccctttgacc
atgtttctaaccaagtag
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