KEGG   Pediococcus damnosus: ADU72_2329
Entry
ADU72_2329        CDS       T04321                                 
Name
(GenBank) Type I restriction-modification system, restriction subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pdm  Pediococcus damnosus
Brite
KEGG Orthology (KO) [BR:pdm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pdm02048]
    ADU72_2329
Enzymes [BR:pdm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     ADU72_2329
Prokaryotic defense system [BR:pdm02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   ADU72_2329
SSDB
Motif
Pfam: SWI2_SNF2 ResIII T1R_D3-like HSDR_N DEAD AAA_22 SLFN-g3_helicase
Other DBs
NCBI-ProteinID: AMV68386
LinkDB
Position
pL21535-4:complement(16591..19563)
AA seq 990 aa
MAEDKFEQAVIDKLKSEGWEYLTDYSSVTVDRLYDHWRDIMNANNRKRLEDTPLSDNEFE
QVKLELTKNKTPYDAQLMLAGAGGVGTVPLNRDDGTQLELEIFYGDEVAGGHSRYEVVNQ
ITFTDLATSLSSKRRIDIMLLINGLPVAHIEEKDESLQNQWNAFEQFQKYDGDGMYTGLF
SFVQVQFVLSQNSAHYFARPKNSDSYNRDFAFGWRDDAGKDVTNTMTFIHEVMGIPALHR
LVTVNMIPDAANDNLMVMRSYQIQATRQILDRMREMDQNGLVEKEGGYVWHTTGSGKTVT
SFKVAQLLASRPRVEDVLFIVDRVDLVNQTYENFKSFAYKTFENRIQVVNGSELKRALKH
DNTAHIYLITVQGLDKAIKSGLASNKRMVILMDEAHRSASGDAVSRIKQALPKTTWFGFT
GTPNFYSDEVHDVKTSKDVSTHAIFGPCLHRYTIKDAIGDGNVLGFDVTYYETDFEHDMD
SGLTEKELEKEVYASLPFRQAVVADIQRNWATNASGPINMGVREPNQFQGMLAVSGKQAV
ASYYSLFKQLAPELRVAMTYSRDEANGTGASDLQAALKQAMQDYMTFYGTRNFLEDKDPQ
RAYLNDMTKRIARKKPYNKGNDADRLDLIIVSDQLLTGFDSKFVNIIYMDKILGEGPLIQ
AMSRTNRTIDKTAKPHGKVRFYRQGAVMEEKVKDALVIYTKGGNDTLADAGNTPDDQEQK
DLFDEGILAPKAADKIVDLNPQIKRLQQLAGDDFSQMPRSEKEQVEFAVTAAQVNSQVQQ
LVQQGYVLGNSVEGPEGPITLGIESATQLSSLQARMNDVNEVLPADKQVDLTNIKLVLQS
FANEIIDYDKLVDLLNAYMDEVSVANRAAVEEHVQPLDQDNREEIGQVLDGIEQGEYTEP
FTTETLKSVRKAIRTAQQDLKIYKWAADHDYNGNDILAAYELYRPGIPLVDNTALNQYLQ
DLESHLDIGFFELADFEESLLNYFAKITKK
NT seq 2973 nt   +upstreamnt  +downstreamnt
atggcggaagataaatttgaacaagcggtaattgacaagctaaagagtgaaggttgggaa
tatctaacagattattctagtgtaacagttgatcggttatatgatcactggcgagatatt
atgaatgccaacaatcgtaaacgactagaagatactccgttatctgataatgagtttgaa
caagtgaagttggaactaacgaagaataaaacgccgtatgatgcgcaactcatgttggcg
ggtgcgggtggtgttgggaccgtaccgttgaatcgtgatgatgggacgcagctagaactt
gaaatattctatggtgatgaagtggctggtggacattcacgttatgaagtcgttaaccaa
attacgtttacggatttagcaacgagtctcagctctaagcgtcgaattgatatcatgttg
ctgattaacgggctacctgtggcccacattgaagaaaaagatgagtccctgcaaaaccag
tggaatgcgtttgagcagttccaaaagtatgacggtgacggcatgtacacgggactcttt
tcttttgtgcaagtgcaattcgttctatcacaaaattcagcgcactattttgcacgacca
aagaatagtgactcgtacaaccgtgattttgcgtttggctggcgtgatgatgccggtaag
gatgtcacaaatacgatgacctttattcatgaagtaatgggtattccggccttacatcgc
ttagtgacagttaatatgatccctgatgcggccaatgataacttaatggtcatgcgctcg
tatcagattcaagcaacgcggcaaattttagatcgcatgcgtgaaatggatcaaaacggg
ttggttgaaaaagaagggggctacgtttggcacaccacgggttctggtaaaacagtcacc
tcatttaaagtggcgcaactactggcttcacgaccaagggttgaagatgttttgtttatt
gtggatcgggttgacttagtcaatcagacctatgaaaactttaagtcatttgcctataag
acctttgaaaatcggattcaagtggtgaatgggagtgaactaaagcgtgctcttaagcac
gataacacggcccatatctatttgattacggtacaaggcttggataaggccattaaatca
ggtctagcctctaataagcggatggttattttaatggatgaggcccaccgatcagccagt
ggtgatgccgtcagccgaattaaacaagcgttaccgaaaaccacttggtttgggtttaca
gggacgcctaatttttatagcgatgaagtccatgacgtgaaaacctctaaggatgtttca
acccatgctattttcgggccgtgtttacaccggtatacgattaaggacgctattggtgac
ggtaacgtccttgggtttgatgtgacgtattatgagactgattttgaacacgatatggat
agtggtttaactgaaaaggaactggaaaaagaagtatatgccagtctgccattccgccaa
gccgttgtggcagatattcagcgtaattgggctacgaatgctagcggaccaattaacatg
ggggtccgtgagcctaatcagttccaaggtatgttagcggtgtctggtaagcaagccgtt
gcttcttattacagtcttttcaagcaactagcacctgagttacgtgttgctatgacctat
tcgcgtgatgaagccaatgggacgggtgcatcagacttacaagctgctctaaagcaagca
atgcaagactacatgacgttctacggcacacgtaatttcttagaggacaaggatccacaa
cgggcgtacctcaatgatatgaccaagcgcattgcccgtaagaaaccttataacaagggt
aatgatgccgatcgattggacttgattattgtgtcagatcaattattaacgggatttgat
tcaaaattcgttaacatcatctacatggataagattttgggtgaaggtcccctgattcaa
gcaatgtcacgaactaaccggacaattgataagacagctaaacctcatggtaaagtgcgt
ttttatcgtcaaggtgcggtaatggaagaaaaagtgaaggatgcgttggttatctatacc
aaagggggcaatgataccttagcggatgcggggaataccccggatgatcaggaacaaaaa
gatttgtttgatgaaggaattttggcgcctaaggcagctgataaaattgtcgacttgaac
ccccaaatcaagcgtttacagcaattagcgggtgatgatttttcacagatgccgcgttct
gaaaaagaacaagtcgagtttgccgtgacagccgcccaagttaactcgcaagtccaacaa
ttagtgcaacaaggatatgtcttggggaactctgttgaaggaccagaaggacctatcaca
ctaggcattgagagtgcaacgcagctcagctcattgcaagcacgcatgaacgatgtgaat
gaagtcttaccagctgacaagcaagttgatttaacgaatatcaagctggtgttgcaatcc
tttgcgaatgaaattattgattacgataaactagtcgatttattgaatgcgtatatggat
gaagtcagtgttgccaaccgtgcagccgttgaagagcatgtacagcccttagatcaagat
aatcgtgaagagattggacaagtcttagatggtatcgaacaaggggagtatacggagcct
tttacaactgaaacactcaagtcagtccgtaaggcgatccgcactgcgcaacaagactta
aaaatttacaaatgggcagccgaccatgattacaatggcaacgatattctagcagcttac
gagctataccgccccggcattccattagttgataacaccgcgctgaatcaatatttacaa
gacttagagagtcacttggacattggcttctttgagctagctgactttgaagagtcgcta
ctgaactactttgctaaaattaccaaaaaataa

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