Prevotella denticola: HMPREF9137_0015
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Entry
HMPREF9137_0015 CDS
T01459
Name
(GenBank) TonB-linked outer membrane protein, SusC/RagA family
Organism
pdn
Prevotella denticola
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Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
CarboxypepD_reg
Cadherin_pro
Motif
Other DBs
NCBI-ProteinID:
AEA21930
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Position
complement(20084..23518)
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AA seq
1144 aa
AA seq
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MFLAVFILLVSWASPASAQVAGKKFSISFKDKGVAQILDFISTKGDYQIRYSDDVKNDSL
LLTISFEDVDELGAVESLLSHTSFTYNVDGKVIDVFKMKNATQGKYTVHGTVKDKDGLGV
PFAIVQIKGTSKGVTADVDGNFSMPVDQEEGTISISSVGYEAKTLKYHAGKPLNVTLPSS
AYAMGEVTVVAYGKRNTREQVGAVASVKVEDLQKAPTASIENLLQGRMAGVDVTNLSGSP
GGGGSRITIRGFSSLNQQGVNDGTPLYVIDGIPVSGSATEATGGINPLAGLDPSSIESVQ
VLKDAASASLYGSRAGNGVILITTKKGKSGRTEVSFNVSQSLSWLPSTPMQTMGKGERDI
ALLLAKSQRGAHYDYLTDKLVYPHSYKDSYGWDADNDGAYDYLWRNGKVLDPDRRLPGIA
QDSLNTFYNNRTNWWKYAFRVGKLTKADMQLAGGTDNIRYMVNAGIYDETGIMISSNFRR
YSLLSNLDFNLSTKLSAFTRINLTYATQKAGSDGGRVQGLTFDPKRTSTLLPGKGSTAEQ
IALRQLRDIDKTNSNYNVRLSVGLNYNILKGLKFSSTYSLDHYFTRVYTFTPDYLKYDLK
SEVQASNIAMTNIQTENILTYNLALPHEHKLELMAGMTYNYDLLQNLNGTAKGGPTNSIK
YAGEGWPSLLNDGGTTRAAQSFRTDQQEQALVSFLGRAAYSYKKRYMAELSIRSDGSSVF
GKDVRWGTFPSVGLGWAFSEEPFMKRLWWLSFGKLRASWGKSGQKFQEPYLALGVMEESN
VYNGSLGLIPQSMANKKLTWEESDQYDLGLDLQLLDYRLKFKLDYYYKYSSKLLMQSYLP
GNVFLANNMWDNASAISNEGIEFEAQYDIIRKKNWNWSVGLNLSHNKNMLRKTYNGEDLN
DKVLGRPVYGIYTFKDEGIVQKEEDIPMYRNASGKLMPLYFQSINNPLRVGGRKIKDQNY
DGVIDDKDLYYAGSTLPAVYGGLNSHLEWKGLSLDVLFSYTIGRKVMNMYKNSAFTFTKD
FGVIMNYFHASDFWTPENRDAKYPSLEFADKDYVGQFDGNVDSNIENISFLRLKQLVIGY
QLPKNWLKGSFIKDANIYLSGENLFLITNYSGVDPEVINPYTGKDDGTQYPLNRKVTLGL
NLKF
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
gtgtttctggcggtttttatcctgctggtgtcgtgggcttctcctgcttccgcccaggtt
gcagggaagaaattctcgatttcgttcaaggataagggcgttgcccagattttagatttc
atttcaacaaagggagattaccagatccgttattccgatgatgtgaagaacgactcgctg
ctcctgaccatctctttcgaggatgtggacgagctgggagccgtggaaagcctgctgtcg
catacatcctttacatataatgtggatggaaaggtgattgatgtgttcaagatgaagaac
gcaacacaggggaagtacacggttcatggaacggtgaaagacaaggacggactgggtgtc
ccctttgccattgtacagataaaaggaacatcgaagggcgtcacggccgatgtagacgga
aacttttccatgcctgtcgaccaggaagaagggacgatcagcatctccagcgtgggttac
gaggcaaagacgctgaagtatcatgccggtaaacccctgaatgtcaccctgccttcgtcg
gcctatgcaatgggcgaggtgacggtagtggcatacggcaagcgcaatacacgtgagcag
gtgggagctgtcgcttccgtgaaggtagaagatctgcagaaagctccgacggcaagcatc
gagaacctgctgcagggacgtatggcaggtgtagacgtgactaacctctcgggttcaccc
ggcggtggcggatcgcgtattaccatccgtggcttcagctcgctgaaccagcagggtgtc
aacgacggaacgcccctttatgtcattgacggtattcctgtgtcgggcagtgccacggaa
gcgaccggaggtatcaaccccttggcaggactggacccttcgagcatcgagtcggtccag
gtgctcaaggatgccgcctcggcctctctctacggatcgagggccggcaacggtgtcatc
ctcattaccacgaagaagggcaagtccggtcgtacggaggtcagcttcaatgtgtcacag
tcgctctcctggctgccgagtacgccgatgcagacaatgggaaagggagaacgtgacatc
gccctgctcctggcaaagagccagcggggagcccactatgactatcttaccgacaaactt
gtctatcctcattcctataaggactcttatggctgggatgccgacaacgacggtgcctac
gactatctgtggcgcaacggaaaggtgctcgatccagaccgtcgtctgccgggtattgcg
caggactcgctcaacactttctacaacaaccgtacgaactggtggaagtacgccttccgt
gtcgggaagctgacgaaggccgatatgcagctggcaggcggtacggacaatatccgatac
atggtcaatgccggtatctatgacgagacgggcatcatgatcagttccaatttccgccgt
tacagtctgttgagcaatcttgacttcaatctgtcgacgaagctgagtgcctttacacgc
atcaacctcacctatgccacgcagaaagccggctcggacggaggacgcgtgcagggactg
accttcgaccccaagcgcacgtccacactgctgcctggcaagggcagtacggcagagcag
atagccttgcggcagctgcgggatattgacaagaccaactccaattataatgtacggctg
agtgtcggactgaactataatatcttgaaagggctgaaattctcgtctacttattcgctc
gaccattatttcacacgtgtctatacgttcacgcctgattatctgaaatacgatttgaag
tcggaggtccaggcttccaacattgccatgacgaacatccagacggagaatattctcact
tataaccttgcacttccgcatgagcacaagctcgagctgatggcaggtatgacctataac
tatgacctgctgcagaacctgaatggtacggcgaagggcggtcctaccaattccatcaag
tatgccggtgagggatggccctcacttctcaacgacggaggtacgacaagagctgcacag
agtttccgcaccgaccagcaggaacaggcgctggtcagtttcttaggccgtgcggcttac
agctataagaagcgttacatggccgagctttccatccgttcggacggctcgagtgtgttc
ggaaaagatgtccgctggggtacattcccgtcggtggggcttggctgggcattcagtgaa
gagccttttatgaagcgtctgtggtggttgagcttcggcaagttgcgtgcctcatggggc
aagtcggggcagaaattccaggaaccttatctcgctttgggtgtgatggaggaaagcaat
gtctataacggctcgttaggcctgataccacagtccatggcgaacaagaagctgacgtgg
gaggagagcgaccagtacgacctcgggcttgacctgcagctgctggattatcgtctgaaa
ttcaagctggattattactataagtattccagcaagttgctgatgcagtcctatctccca
ggcaacgtgttccttgcaaacaatatgtgggacaacgcctctgccatatccaacgagggt
atagagtttgaagcacagtatgacatcatccgtaagaagaactggaactggagtgtcggc
ctgaacctttcgcacaacaagaacatgctgcgcaagacctataacggcgaagacctcaac
gacaaggtgctcggccgtccggtctatggcatctataccttcaaggatgaaggaatcgtg
cagaaggaggaggacatcccgatgtaccgcaatgcgtcaggcaagctgatgccgctctat
ttccagtccatcaacaatccgctgcgtgtcggtggccggaagatcaaggaccagaactat
gacggtgtaatcgacgacaaagacctttattatgccggcagtacgcttcctgctgtctac
ggcggactgaacagccatctggaatggaaagggctgagtctcgacgtgctctttagctat
acaatcggacgcaaggtgatgaatatgtacaagaacagcgccttcacctttacaaaggac
ttcggggtcatcatgaactacttccatgccagcgacttctggacaccggagaacagggat
gcgaagtatccgtcacttgagttcgccgacaaggattatgtggggcagtttgacggcaac
gtcgactccaacatcgagaacatcagcttcctgcgtctgaagcagctggtcatcggctac
cagcttccgaagaactggctgaaggggtctttcatcaaggatgccaatatctacctcagt
ggtgagaacctgttcctgattacaaactattctggtgtagacccggaggtcatcaatcct
tataccggtaaggacgacggtacccagtaccccttgaaccggaaagtcaccttgggactc
aacttaaaattctaa
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