Prevotella denticola: HMPREF9137_0056
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Entry
HMPREF9137_0056 CDS
T01459
Symbol
yfiO
Name
(GenBank) outer membrane assembly lipoprotein YfiO
KO
K05807
outer membrane protein assembly factor BamD
Organism
pdn
Prevotella denticola
Brite
KEGG Orthology (KO) [BR:
pdn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdn02000
]
HMPREF9137_0056 (yfiO)
Transporters [BR:
pdn02000
]
Other transporters
Pores ion channels [TC:
1
]
HMPREF9137_0056 (yfiO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YfiO
TPR_6
TPR_16
TPR_12
TPR_9
TPR_14
TPR_2
Effector_1
Alkyl_sulf_dimr
TPR_8
Fis1_TPR_C
Motif
Other DBs
NCBI-ProteinID:
AEA20410
LinkDB
All DBs
Position
complement(63986..64858)
Genome browser
AA seq
290 aa
AA seq
DB search
MRIYRIICNFAFQSQIMKKRILIGICAALLCTSCAHEYNQVYKTTNNDYKYEFAKECFAK
GKYGFAVPLLQDLVTVEKGTDNAQECLYMLGMAEYGLKDYQAASETFKKYYQTYPRGQYA
EMASFYIGQSLFEGTPEPRLDQTPTVAAIAAFQDYLDIYPNGKLKGTAQQRLFDLQDKLI
RKEYLSAKLYYNLGSYFGNCTSGGNNYEACIITAQNALNDYPYSNMREDFAVLVMKSKYE
LAQMSVEAKKLQRFQDAEDECYGFINEYPDSKERKTAEEYIKKCKEITKD
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtatttatagaataatatgtaactttgcatttcaaagtcagattatgaagaaaaga
atcctcattggcatttgcgccgccttgctctgtacaagttgcgcccatgaatataatcag
gtctacaaaacaaccaacaatgattataaatatgagttcgcaaaggaatgttttgcaaag
gggaagtacggctttgccgtaccgttgctgcaggatctcgtgacagtggagaaaggtacc
gacaatgcccaggaatgcctttatatgctcggaatggcagaatatggattgaaagactat
caggctgcgtcggagactttcaagaaatactatcagacctatccgcgcgggcagtatgcc
gaaatggcttcgttctacatcgggcagagcctctttgagggtacgccggagccgcgtctt
gaccagacgcctactgtcgccgccatcgccgctttccaggactatctggacatttatccg
aacgggaaactgaaaggtacggcccagcagcggctgttcgatctgcaggacaagctgatc
agaaaggagtatctcagtgcaaagctgtactacaatctcggttcctatttcggcaactgc
accagcggcggcaacaattacgaggcctgcatcatcacggcccagaatgccttgaacgac
tatccttacagcaatatgcgggaagatttcgccgtactcgtcatgaagagcaagtacgaa
ctggcgcagatgagcgtcgaggcaaagaaactgcagcgtttccaggatgccgaagacgag
tgctacggattcatcaacgagtatcccgactccaaggagcgcaagaccgccgaggagtac
ataaagaaatgtaaggagataacaaaggactaa
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