KEGG   Prevotella denticola: HMPREF9137_0198
Entry
HMPREF9137_0198   CDS       T01459                                 
Name
(GenBank) S1 RNA binding domain protein
  KO
K08301  ribonuclease G [EC:3.1.26.-]
Organism
pdn  Prevotella denticola
Brite
KEGG Orthology (KO) [BR:pdn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdn03019]
    HMPREF9137_0198
   03009 Ribosome biogenesis [BR:pdn03009]
    HMPREF9137_0198
Messenger RNA biogenesis [BR:pdn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HMPREF9137_0198
Ribosome biogenesis [BR:pdn03009]
 Prokaryotic type
  rRNA processing factors
   HMPREF9137_0198
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio Rogdi_lz S1
Other DBs
NCBI-ProteinID: AEA20832
LinkDB
Position
217944..219515
AA seq 523 aa
MTSEVIIDAQPKEISIALLEDKRLVEYQREPREASFSVGNIYVAKVKKLMPGLNACFVDV
GYERDAFLHYLDLGSQFSSYAKYLKQVQSDRKRLYPIQKASRLPDLQKDGTVQNTLQVGQ
EVMVQIVKEPISTKGPRLTGEISFAGRFLVLIPFGHKVSVSSKIRSGEERARLKQLIQSI
TPKNFGVIVRTVAEGKRVAELDAEMKVLMSRWNEAITKVQKTQERPQLIFEETGRAVAML
RDLFNPTYENIYVNDNEICTAVRHYVSLIAPEKAGIVKKYNGKVPIFDNFDVTKQIKSSF
GKTINYGHGCYLIIEHTEAMHVVDVNSGNRTKEKAQEQNALDTNLGAADELARQLRLRDM
GGIIVVDFIDMNLAEDRQMLYERMCKNMQKDRARHNILPLSKFGLMQITRQRVRPVMDVD
VDEDCPTCFGTGKIRSSILFTDQLERKIDRLVNKVGVKKFYLHVHPYVAAYINKGFVSLK
RKWQIKYGMGVHIIPSQKLAFLQYEFYDAKQQFIDMKEQNDRS
NT seq 1572 nt   +upstreamnt  +downstreamnt
atgacaagcgaagtaattatcgatgcccaaccgaaagagatttcgattgcactgctcgaa
gacaagcggctggtggaataccagcgcgagccgagagaggccagcttctcggttggcaac
atctacgtggcaaaggtcaagaaactgatgccggggctgaacgcctgctttgtagatgtc
ggttatgagcgtgacgcctttcttcattatctcgacttaggaagccagttcagctcctat
gcaaagtatctgaaacaggtccagagcgaccgtaaacggctttatcccattcagaaggcc
agccgccttcccgacctgcagaaggacggcaccgtccagaacacgctgcaggtgggccag
gaggtgatggtacagatcgtaaaagaacccatttccaccaaggggccgcgcctcacgggc
gaaatatccttcgccggcaggttcctggtgctgattcctttcgggcataaagtcagcgtc
tcatcgaaaatcagaagcggagaggagcgcgcgcgcctcaagcagctcatacagagcatt
acgcccaagaacttcggggtgatcgtccgtacagtggctgaaggaaagcgtgtcgccgaa
ctcgatgccgaaatgaaggtgctcatgagtcggtggaacgaggccatcacgaaggtgcag
aagacacaggaacgtccccagctcattttcgaggagacaggacgtgccgtcgccatgctg
cgcgacctcttcaacccgacctacgagaacatctacgtcaacgacaacgaaatctgcacc
gccgtccgtcactatgtctctctaatagcccctgaaaaggcgggcatcgtgaagaagtac
aacggcaaggtgcctatcttcgacaacttcgacgtgacgaagcagatcaagtccagtttc
ggaaagaccatcaactacggacacggctgctacctcatcatcgaacacacggaggccatg
cacgtcgtggacgtgaacagcgggaacaggacgaaggagaaagcacaggaacagaacgcg
ctcgacaccaatctcggcgccgccgacgaactcgcccgccagctgcggctgcgcgacatg
ggcggaatcatcgtcgtcgacttcatcgacatgaatctggccgaagaccgccagatgctc
tacgaacgaatgtgcaagaacatgcagaaggaccgtgcccgccacaacatccttccgctg
agcaagttcggactgatgcagatcacccggcagcgtgtgcgcccggtaatggacgtggac
gtagacgaagactgccccacctgtttcggcacgggcaagatccgctcgagcattctcttc
accgaccagctggaacggaagatcgaccggctggtgaacaaggtcggagtaaagaagttc
tatctgcacgttcatccctatgttgccgcctacatcaacaaaggctttgtctccctgaaa
cgaaaatggcagataaagtacgggatgggggttcacatcattccttcacagaaacttgct
ttcttgcagtatgagttctatgatgcgaaacagcagttcatcgacatgaaggaacagaat
gacaggtcctga

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