Entry |
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Name |
(GenBank) S1 RNA binding domain protein
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KO |
K08301 | ribonuclease G [EC:3.1.26.-] |
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Organism |
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Brite |
KEGG Orthology (KO) [BR:pdn00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pdn03019]
HMPREF9137_0198
03009 Ribosome biogenesis [BR:pdn03009]
HMPREF9137_0198
Messenger RNA biogenesis [BR:pdn03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HMPREF9137_0198
Ribosome biogenesis [BR:pdn03009]
Prokaryotic type
rRNA processing factors
HMPREF9137_0198
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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Position |
217944..219515
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AA seq |
523 aa
MTSEVIIDAQPKEISIALLEDKRLVEYQREPREASFSVGNIYVAKVKKLMPGLNACFVDV
GYERDAFLHYLDLGSQFSSYAKYLKQVQSDRKRLYPIQKASRLPDLQKDGTVQNTLQVGQ
EVMVQIVKEPISTKGPRLTGEISFAGRFLVLIPFGHKVSVSSKIRSGEERARLKQLIQSI
TPKNFGVIVRTVAEGKRVAELDAEMKVLMSRWNEAITKVQKTQERPQLIFEETGRAVAML
RDLFNPTYENIYVNDNEICTAVRHYVSLIAPEKAGIVKKYNGKVPIFDNFDVTKQIKSSF
GKTINYGHGCYLIIEHTEAMHVVDVNSGNRTKEKAQEQNALDTNLGAADELARQLRLRDM
GGIIVVDFIDMNLAEDRQMLYERMCKNMQKDRARHNILPLSKFGLMQITRQRVRPVMDVD
VDEDCPTCFGTGKIRSSILFTDQLERKIDRLVNKVGVKKFYLHVHPYVAAYINKGFVSLK
RKWQIKYGMGVHIIPSQKLAFLQYEFYDAKQQFIDMKEQNDRS |
NT seq |
1572 nt +upstreamnt +downstreamnt
atgacaagcgaagtaattatcgatgcccaaccgaaagagatttcgattgcactgctcgaa
gacaagcggctggtggaataccagcgcgagccgagagaggccagcttctcggttggcaac
atctacgtggcaaaggtcaagaaactgatgccggggctgaacgcctgctttgtagatgtc
ggttatgagcgtgacgcctttcttcattatctcgacttaggaagccagttcagctcctat
gcaaagtatctgaaacaggtccagagcgaccgtaaacggctttatcccattcagaaggcc
agccgccttcccgacctgcagaaggacggcaccgtccagaacacgctgcaggtgggccag
gaggtgatggtacagatcgtaaaagaacccatttccaccaaggggccgcgcctcacgggc
gaaatatccttcgccggcaggttcctggtgctgattcctttcgggcataaagtcagcgtc
tcatcgaaaatcagaagcggagaggagcgcgcgcgcctcaagcagctcatacagagcatt
acgcccaagaacttcggggtgatcgtccgtacagtggctgaaggaaagcgtgtcgccgaa
ctcgatgccgaaatgaaggtgctcatgagtcggtggaacgaggccatcacgaaggtgcag
aagacacaggaacgtccccagctcattttcgaggagacaggacgtgccgtcgccatgctg
cgcgacctcttcaacccgacctacgagaacatctacgtcaacgacaacgaaatctgcacc
gccgtccgtcactatgtctctctaatagcccctgaaaaggcgggcatcgtgaagaagtac
aacggcaaggtgcctatcttcgacaacttcgacgtgacgaagcagatcaagtccagtttc
ggaaagaccatcaactacggacacggctgctacctcatcatcgaacacacggaggccatg
cacgtcgtggacgtgaacagcgggaacaggacgaaggagaaagcacaggaacagaacgcg
ctcgacaccaatctcggcgccgccgacgaactcgcccgccagctgcggctgcgcgacatg
ggcggaatcatcgtcgtcgacttcatcgacatgaatctggccgaagaccgccagatgctc
tacgaacgaatgtgcaagaacatgcagaaggaccgtgcccgccacaacatccttccgctg
agcaagttcggactgatgcagatcacccggcagcgtgtgcgcccggtaatggacgtggac
gtagacgaagactgccccacctgtttcggcacgggcaagatccgctcgagcattctcttc
accgaccagctggaacggaagatcgaccggctggtgaacaaggtcggagtaaagaagttc
tatctgcacgttcatccctatgttgccgcctacatcaacaaaggctttgtctccctgaaa
cgaaaatggcagataaagtacgggatgggggttcacatcattccttcacagaaacttgct
ttcttgcagtatgagttctatgatgcgaaacagcagttcatcgacatgaaggaacagaat
gacaggtcctga |