Prevotella denticola: HMPREF9137_0351
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Entry
HMPREF9137_0351 CDS
T01459
Name
(GenBank) AMP-binding enzyme
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pdn
Prevotella denticola
Pathway
pdn00061
Fatty acid biosynthesis
pdn01100
Metabolic pathways
pdn01212
Fatty acid metabolism
pdn02024
Quorum sensing
pdn04146
Peroxisome
Module
pdn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pdn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HMPREF9137_0351
00071 Fatty acid degradation
HMPREF9137_0351
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HMPREF9137_0351
09145 Cellular community - prokaryotes
02024 Quorum sensing
HMPREF9137_0351
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pdn01004
]
HMPREF9137_0351
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdn04147
]
HMPREF9137_0351
Enzymes [BR:
pdn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HMPREF9137_0351
Lipid biosynthesis proteins [BR:
pdn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HMPREF9137_0351
Exosome [BR:
pdn04147
]
Exosomal proteins
Exosomal proteins of breast milk
HMPREF9137_0351
Exosomal proteins of breast cancer cells
HMPREF9137_0351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
RuvA_C
RAP
Motif
Other DBs
NCBI-ProteinID:
AEA22043
LinkDB
All DBs
Position
complement(392945..394753)
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AA seq
602 aa
AA seq
DB search
MQTNCHLSVLIHEQAKKYGARPVLTFRSFGSLKWKTVSWNQFSMRVKEVSNALLNLGLKP
QETIAVFAQNCIQYLYTDFGAYGVRVISIPFYATSSEQQIQYMIQNASVRFLFAGEQEQY
DKAHRVAALCPTLERIIVFDPSVRISSHDPNSIYFEDFLKLGEGLPREPEVEERWAAAEE
DDICNILYTSGTTGESKGVVLTYRMYRAALEANDRCVPVDEKDRIINFLPFAHVFERGWA
YLVLSEGAQMIVNTYPKEIQQSMRETHPTCMSAVPRFWEKVYVAVKERMDNSGAVQRKLF
YHALSVGRKRNVQYLSHGKRVPLALEMEYRVVNRTILSLVRKQLGLEHPNIFPTAGAYVS
PEVEEFVHSIGLNMIVGYGLTESLATVSCDHLGEPYTIGSVGRPIEGIEIKISDEGEVML
KGPTIMPGYFRRDTTNAEVFDKDGFFHTGDSGYLKDGELFLKERIKDLFKTSNGKYVAPQ
MVEGMLLVDKFIEQISVIADQRKFVSALIVPEYDVLEEWAKENHIEFNDREELCRNRQVN
AMMRERIETLQQRLAPYEQIKRFTLLPHHFSMESGELTNTLKLKRSVVNRHYQDVIDKMY
EE
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgaattgtcatctctctgttcttattcatgaacaagccaagaaatacggtgca
agaccggtactgaccttccgcagcttcggcagcctgaagtggaagactgtttcgtggaat
cagttctccatgcgtgtgaaggaggtttccaacgcactgctgaacctcggcttgaaaccg
caggagacgattgcggtgtttgcgcagaactgcatccagtatctttatactgacttcggc
gcatacggtgtccgcgtaatcagtattcctttttatgccaccagctcagagcagcagata
caatacatgattcagaatgcaagcgtaagattcctttttgcaggcgagcaggagcagtac
gacaaggcgcaccgtgtcgccgcactctgtcctacgctggaacgcatcatcgtcttcgac
ccgagcgtgcgtatcagttcgcatgaccccaacagcatttactttgaagatttcctgaag
ttgggcgagggactgccgcgggaaccggaagtcgaggaacgctgggcggcggcggaagaa
gatgatatctgcaatattctttacacgagcggtacgacgggggagagcaagggcgtcgtg
ctgacctacaggatgtaccgtgcggcactggaagcaaacgacaggtgtgtgccggtggat
gaaaaagaccgtatcatcaatttcctgcctttcgctcatgtctttgagcgtggatgggct
tatctggtactttccgaaggggcacagatgatcgtgaacacttatccgaaggagattcag
cagagcatgcgggagacgcatccgacgtgtatgtcggccgtaccccgtttctgggagaag
gtctatgtggctgtcaaggaacgcatggacaattccggtgccgtacagcgcaagctcttc
tatcacgccctgagcgtcggaagaaaacgcaatgtgcagtacctgtcgcatggaaaacgt
gtcccgctggcactggagatggagtacagggtcgtcaacaggacgattttgagcctcgtc
cgaaagcagctggggctggaacatccgaatatcttcccgacggcaggtgcctacgtttca
cctgaggtcgaggaattcgtacacagcatcggactgaacatgatcgtcggctacggtctg
acggaaagtctggccacggtcagctgcgaccatctgggcgagccttataccatcgggtct
gtaggccgtccgattgaaggcatagaaataaagatcagtgacgagggcgaagtgatgctg
aaggggcctaccatcatgccgggctatttccgccgtgatacgacgaatgcggaggtcttc
gacaaggacggattcttccacactggcgactcgggctatctcaaggacggtgaactgttc
cttaaggagcgcatcaaggacctcttcaagacttccaacggcaaatacgtcgcgccgcag
atggtggaaggcatgctgctggtggataagttcatcgagcagatttccgtcatcgccgac
cagcggaagttcgtttctgcactgattgttcccgaatacgatgtgctggaggaatgggca
aaggagaaccacatcgagttcaacgaccgtgaagagctgtgccggaacaggcaggtcaat
gcgatgatgcgtgagcgtatcgaaaccttgcagcagcgtctcgcaccttacgagcagatc
aagcgtttcacgcttcttccacatcatttctcgatggagagcggtgaactgacgaatacg
ctgaagctgaagcgttcggttgtcaaccgccactatcaggatgtgattgacaagatgtat
gaagagtag
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