Prevotella denticola: HMPREF9137_0408
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Entry
HMPREF9137_0408 CDS
T01459
Symbol
secD
Name
(GenBank) export membrane protein SecD
KO
K12257
SecD/SecF fusion protein
Organism
pdn
Prevotella denticola
Pathway
pdn02024
Quorum sensing
pdn03060
Protein export
pdn03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pdn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HMPREF9137_0408 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HMPREF9137_0408 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HMPREF9137_0408 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pdn02044
]
HMPREF9137_0408 (secD)
Secretion system [BR:
pdn02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HMPREF9137_0408 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
Motif
Other DBs
NCBI-ProteinID:
AEA20184
LinkDB
All DBs
Position
complement(466478..469501)
Genome browser
AA seq
1007 aa
AA seq
DB search
MQNKGLVICVAVLLTLASIFYLSFSVATSYYDSQAAKIKDPIAQQDYKDSVKYLGIYSYQ
KCLETQIGLGLDLKGGMNVVLEISVPDVVDVLADHKQDAAYQKAMAEAKQEEMTSQKDFI
TLFIDAYHKVAPGHSLAEVFATQQLKGKVSTQSSDSEVEKALREEVASAIDNSYNVVTNR
IDQYGVVQPNIQKLEGQEGRLMVEMPGIREPERMRKLLQGSANLEFWETYNNQEVAPYLA
QLDQRLANGDTKADTVAADSTRKAQAKPAATPKFALKADKSAAAGEDAQTAALKKMHPLL
SMLQTIPGDALSLVGYASVRDTAAINKLIHSPLAKQVLPSDLKLLWGAKPADGLNKKNVY
ELYALKITTADGRAPMEGDVVTDAKDQFDQFGRPEVSMTMNSEGAREWAALTKANVGKAI
AIVLDGVVYSAPRVDGEIDGGQSSIRGNFTIEDTKDLANTLKSGRMPAPAKIVQEEVVGP
TLGAQSIQQGLVSFVIAFVLLMLYMIVMYNVIPGMMANLALIANLFFTLGVLASFQSALT
MPGIAGIVLTLGTAVDANVLIYERIKEELRLGKGMKQALHEGYSNAFSAIFDSNLTSLIT
GVILLVTGTGPIRGFATTWIIGIIISFFTAVFLTRLVFENRVSNDKWLNLTFSTGFSKNF
MQGKNFHFLSMYKRSFTVWGVAVVICIVSFVVRGLSRSIDFTGGRNYVVTLNKPTQVEDV
RKVMNGAFVNTVGEKAGKPATTNVIALGTDGKTVRISTNYNIESNDPLEDDKAETILYKA
LKRGGFVSQTSVANFKNPDIREGGSIIQSAKVGPSIAKNITYNAFLSVLLAIFFIFLYIL
LRFRNIGFSVGSIVGLVLDTTIVIGFFSLCYGWIGFSLEIDQTFIGAILTVIGYDINDTV
VVYDRIRENLRNHRHNLAKADIQEIFNSSINQTLSRTINTSVSTLIVLVSIFILGGDSIR
SFAFAMIIGIIIGTLSSIFIASPVAYLVLGKRIEKRSHELAEAPAEA
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacaaaggattagtaatttgcgtagccgtcctcctgacgctcgcaagtatcttc
tacctgtctttctctgtggcgacaagctactatgacagtcaggcagcaaagatcaaggac
cctattgcgcagcaggattacaaggattctgtcaagtatttgggtatctactcttaccag
aagtgccttgagacacagatcgggctcggccttgacctgaagggcggtatgaatgtcgta
cttgaaatttccgtgcccgacgttgtcgacgtgctggccgaccacaagcaggatgctgct
taccagaaagcgatggcggaggccaagcaggaagagatgaccagccagaaggacttcatt
acgcttttcatcgatgcttaccacaaggtagcgccgggccattcgctcgccgaggtcttt
gcgacacagcagctcaagggaaaggtcagcacgcagagttctgacagcgaggtggagaag
gcactccgcgaggaggttgcttcagccatcgacaactcctacaatgtcgttaccaaccgt
atcgaccagtacggtgtcgtccagccgaatatccagaagctcgaagggcaggaaggccgt
ctgatggtggaaatgccgggtatccgagagccggaacgtatgcgcaagctcctgcagggt
tctgctaatcttgagttctgggagacttacaacaaccaggaggttgccccttatcttgca
cagctcgaccagcggcttgccaacggcgataccaaggccgataccgttgccgcagactca
acccggaaagcacaggctaagccggctgcaacgccgaagttcgccctcaaggccgacaag
agtgccgctgccggggaagatgcccagacggccgcactgaagaagatgcacccgctgctc
tccatgttgcagaccattccgggcgatgcactcagcctcgtcggttatgccagcgtacgt
gacacggccgccatcaacaagctgattcacagtccgcttgccaagcaggtgctgccaagc
gacctgaaacttctatggggagccaagccggcagacggtctgaacaagaagaacgtatat
gagctttatgcgctgaagatcaccactgccgacggtcgtgcgccgatggaaggtgatgtc
gtgacagatgccaaagaccagttcgaccagttcggccgtcctgaggtcagcatgacgatg
aattccgagggtgcccgtgagtgggctgccctgacaaaggcaaacgtgggtaaggcgata
gccatcgtgctcgacggcgttgtctactcagctccccgtgtcgacggtgagattgatggc
ggtcagtcgtctatcaggggcaacttcaccatcgaggataccaaggacctggccaacacg
ctgaagtcgggccgtatgccggctccggcaaagattgtccaggaggaagtcgtaggtcct
acgctcggtgcccagtctatccagcaggggctcgtctcgtttgtcattgcctttgtcctg
ctgatgctctacatgatcgtcatgtacaacgtcatcccgggcatgatggccaatctggcg
ctgattgccaacctcttcttcacgctgggcgtgcttgcttctttccagtcggcattgacc
atgccgggtatcgccggtatcgtgctgacactgggtacggctgttgatgccaacgtgctt
atctacgagcgaatcaaggaggagctgcggcttggcaagggtatgaagcaggcactgcat
gaaggctacagcaatgctttctcggccatcttcgactccaacctcacctcgctcatcacg
ggtgtcatcctcctcgtgaccggtacaggtcctatccgcggtttcgcaacgacatggatc
atcggtatcatcatctcgttcttcacggctgtcttcctgacacgtcttgtcttcgagaac
cgtgtcagcaacgacaagtggctgaacctgactttctcgacgggcttctcaaagaacttc
atgcagggaaagaacttccacttcctcagtatgtacaagcgcagcttcaccgtatggggt
gttgccgtcgtcatctgtatcgtcagcttcgttgtccgcggcctgagccgcagcatcgac
ttcacgggcggccgcaactatgttgtcacgctgaacaagcctacacaggtcgaggatgtg
cgcaaggtgatgaacggtgcattcgtcaataccgtcggtgagaaagccggaaagccggcg
acgaccaatgtgattgcgctgggtacggacggcaagacggtacgtatatcgaccaactat
aacatcgagtcgaacgacccgctcgaggacgacaaggctgagaccattctctacaaggcc
ttgaagaggggcggcttcgtcagccagacaagcgttgccaacttcaagaatccggacatc
cgtgagggcggttccatcatacagagtgcgaaggtagggccttccatcgccaagaacatc
acttacaatgcgttcctgagcgtcctgctggccatcttcttcattttcctgtacattctg
ctgcgcttccgtaacatcggattctccgtcggttcaattgtcggtcttgtcctcgacacg
accatcgttatcggattcttctcattgtgctacggctggataggtttctcgctcgagatc
gaccagaccttcatcggtgcaatccttaccgttatcggttacgatatcaacgacacggtg
gttgtctacgaccgtatccgtgagaacctccgtaaccacaggcacaatcttgccaaggca
gacatccaggagattttcaactcttctatcaaccagaccctttcacgtaccatcaataca
tcggtctctacgttgatagtacttgtctccatcttcatcctcggtggcgacagcatccgc
agcttcgcttttgcgatgatcatcggtatcatcatcggtacgttgagctccatcttcatc
gcttcaccggttgcctatctcgtattgggcaagaggatagagaagcgttcgcatgagctt
gccgaagcaccggccgaggcttaa
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integrated database retrieval system
