Prevotella denticola: HMPREF9137_0412
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Entry
HMPREF9137_0412 CDS
T01459
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
pdn
Prevotella denticola
Brite
KEGG Orthology (KO) [BR:
pdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdn03032
]
HMPREF9137_0412 (hup)
03036 Chromosome and associated proteins [BR:
pdn03036
]
HMPREF9137_0412 (hup)
03400 DNA repair and recombination proteins [BR:
pdn03400
]
HMPREF9137_0412 (hup)
DNA replication proteins [BR:
pdn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HMPREF9137_0412 (hup)
Chromosome and associated proteins [BR:
pdn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HMPREF9137_0412 (hup)
DNA repair and recombination proteins [BR:
pdn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HMPREF9137_0412 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
VWA_3
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AEA20888
LinkDB
All DBs
Position
471997..472272
Genome browser
AA seq
91 aa
AA seq
DB search
MNKTELIEKIAAGAGLSKADAKKALDATTEAIKGALVAGDKVQLVGFGTFAVNERPAHEG
INPATKQKIQIAAKKVAKFKAGAELADAVNA
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagacagagttaatcgagaagattgcagcaggtgccggtttgagcaaggctgac
gcaaaaaaagcattggacgcaactacagaggccatcaaaggcgcactcgtagcaggtgac
aaagtacagcttgtaggcttcggtacattcgcagtcaatgagcgtcctgctcatgagggc
atcaaccccgcaacaaagcagaagatacagattgcagccaagaaggttgccaagttcaag
gctggcgcagagctggctgatgcggtaaacgcttga
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