Prevotella denticola: HMPREF9137_0532
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Entry
HMPREF9137_0532 CDS
T01459
Name
(GenBank) ABC transporter, ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pdn
Prevotella denticola
Pathway
pdn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pdn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HMPREF9137_0532
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdn02000
]
HMPREF9137_0532
Enzymes [BR:
pdn01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
HMPREF9137_0532
Transporters [BR:
pdn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HMPREF9137_0532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_25
RsgA_GTPase
AAA
AAA_16
NACHT
AAA_22
Zeta_toxin
nSTAND3
AAA_21
CspB_prodomain
DEAD
AAA_23
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
AEA20990
LinkDB
All DBs
Position
604881..606740
Genome browser
AA seq
619 aa
AA seq
DB search
MREFIHVLLRFVPPYKKYLVLSIIFNILSALLNIFSFATLIPLLQILFKVDAGTGATRIM
AWSEGSFKEVLSNNADYYTQIYITSWGPTTVLLAIGLVLAFMTFLKTGAYFLSSASIIPI
RTGVVRDIRNQLYEKITSLSLGFFSEERKGDIIARMSGDVQEIDGSIMSSIDMLFKNPVL
IVIYFTTLLIISWQLTLFTLVFVPVFGWFMGFVGRKLKQNSITAQTLWSDTMSQVEETLG
GLRVIKAFCAEELMNERFDKVNSQYRNDIMRVNIRQQLAHPMSEFLGTVMIVVVLWFGGT
LVLGQYPIISGPTFIYYLVILYSIINPLKEFSRAGYNIPKGLASMERVDKILKAEVTIHD
PENPIHIKSFQHEIEFRHVSFAYADGKDSDGNPVLQWVLKDINLVIPKGKTVALVGQSGS
GKSTLLDLIPRYYDVQKGEILIDGINIKDLGVHDLRQLIGNVNQEAILFNDSFKNNISFG
VNATDEAIVEAAKIANAHEFILHSEKGYDTNIGDRGGRLSGGQRQRVSIARAILKNPPIL
ILDEATSALDTESERLVQDALYKLMKTRTTIAVAHRLSTIKNADEICVMQEGEIVERGTH
DELMALDGYYKKLHDMQEI
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgagggaattcatacacgtattacttaggttcgtaccgccttacaagaagtacctggtg
ctgtcaatcatcttcaatatattgtcggcattgctcaatatcttctcctttgcaacgctc
ataccgcttctgcagattctcttcaaggtggatgccggaacgggagcgacacgcatcatg
gcatggagcgaggggtccttcaaagaggtactgtcgaacaatgcggattattatacacag
atttacatcacgagctggggaccgacaacagtgctgctggccatcggtctggtccttgcc
ttcatgacattcctgaagacaggagcctacttcctgtcatcggcctccatcatccccatc
cggacgggcgtggtccgcgacattcgcaaccagctctacgagaagatcacatccctttca
ctgggattcttcagcgaggagaggaagggagacatcatcgcccgcatgagcggtgacgta
caggagattgacggttccatcatgtcttccattgatatgctcttcaagaaccccgtcctc
atcgtcatttacttcaccaccctgctgatcatctcctggcagctgacgctcttcacgctc
gtcttcgtgcccgtcttcggctggttcatgggctttgtcggcaggaagctgaagcagaac
agcatcacggcgcagacactgtggagcgacaccatgagccaggtggaagagaccttgggc
ggactgagggtcatcaaggcgttctgtgcggaagaactgatgaacgaacgctttgacaag
gtcaactcccagtaccgcaacgacatcatgcgagtgaacatccgccagcagctggcacac
ccgatgagcgagttcctcgggacggtgatgatcgtcgtcgtcctctggttcggcggtacg
ctcgtccttggacagtacccgattatcagcggaccgaccttcatctactatcttgtcatc
ctctacagcatcatcaacccgctcaaggagttctcccgcgcaggctacaacattcccaag
ggacttgcctccatggagcgtgtggacaagattctcaaggccgaagtgacgatacatgac
ccggagaatcccatacacatcaagtcgttccagcatgagattgagttccgccacgtcagc
tttgcctatgccgacggaaaggacagtgacggcaatccggtgcttcaatgggtgctgaag
gacatcaacctcgtcattccaaagggtaagacggtcgccctggtgggacagagcggcagc
gggaagtctaccctgctcgacctcatcccgcggtactacgacgtgcagaaaggtgagatt
ctcatcgacggcatcaacatcaaggacctgggcgtacacgacctgcggcagctcatcggc
aacgtaaaccaggaggcaatcctcttcaacgacagtttcaagaacaacatctccttcggt
gtcaatgccacagacgaggccatcgtcgaagcggcgaagattgccaacgcccacgaattt
atccttcacagcgagaaaggatacgacaccaacatcggcgaccgtggcggacgcctctcc
ggcggacagcgccagcgtgtcagcatcgcccgtgccattctcaagaacccgcctattctc
atcctggacgaagccacgtcggcccttgataccgagagcgaacggcttgtacaggatgcg
ctctacaagcttatgaagacccgaaccaccatagccgtcgcccaccggctgtccaccatc
aagaatgcagacgagatatgcgtgatgcaagaaggcgaaatcgtggagcgcgggacacac
gacgaactgatggcactggacggctattacaagaaactgcacgatatgcaggaaatataa
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