KEGG   Prevotella denticola: HMPREF9137_0578
Entry
HMPREF9137_0578   CDS       T01459                                 
Symbol
polA
Name
(GenBank) DNA-directed DNA polymerase
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pdn  Prevotella denticola
Pathway
pdn03030  DNA replication
pdn03410  Base excision repair
pdn03420  Nucleotide excision repair
pdn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pdn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HMPREF9137_0578 (polA)
   03410 Base excision repair
    HMPREF9137_0578 (polA)
   03420 Nucleotide excision repair
    HMPREF9137_0578 (polA)
   03440 Homologous recombination
    HMPREF9137_0578 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pdn03032]
    HMPREF9137_0578 (polA)
   03400 DNA repair and recombination proteins [BR:pdn03400]
    HMPREF9137_0578 (polA)
Enzymes [BR:pdn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HMPREF9137_0578 (polA)
DNA replication proteins [BR:pdn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     HMPREF9137_0578 (polA)
DNA repair and recombination proteins [BR:pdn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     HMPREF9137_0578 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HMPREF9137_0578 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 HHH_2 DNA_pol_lambd_f HHH_5
Other DBs
NCBI-ProteinID: AEA21586
LinkDB
Position
complement(670057..672819)
AA seq 920 aa
MAKLFLLDAYALIYRSYYAFLRTPRINSKGLNTSAIMGFCNTLNEVLTKEHPTHIGVAFD
HGKTFRHEVFPAYKAQREETPEDIRQSVPIIKQILEAMRIPILQVDGFEADDVIGTVATR
FGTDGIDTFMLTPDKDYGQLIGPRVFIFRPRHGGGYETLGEKEVESKYGIPTPAQVIDLL
ALMGDSADNFPGCPGVGEKTAAKLINQFGSIDNLLRHTDEIKGKLRDKIENAVEDIKMSK
LLATIRTDVPLQLSLDELKVEQPDEVKLRRIFEELEFKTLANKLLNKSELKPKNVETQLD
LFSVNTPRGQEELEKTNYETHKTVPHEYKLIDNEEEMDRLCDFFMTKEFVSIDTETTSTD
AIRAELVGLSFSVEENKAFYVPLPANREEALKYVRIFKPLYENDNILKIGQNIKYDYEVL
NNYGVTLQGKMFDTMIAHYLIQPELHHNMDYMAETLLGYRTIHIEELIGPKGKKQKNMRD
LSPTDICEYAAEDADITLRLKHLLEPRLKELGLEELFWNIEMPLVRVLADMELNGVCLDT
EALQETSRIFTDRMKQYEQEIYKEAGETFNIGSPKQVGDILFGKLQIMDKPKKTKTGQYV
TSEEVLQSLEAKHPVVRNILNYRGMKKLLSTYIDALPKLINPRTGHIHTSFNQAQTATGR
LSSSDPNLQNIPVRTDDGKEIRKCFIPEDGCLFFSADYSQIELRIMAHLSGDENMMEAFR
EGHDIHRATAAKIWHEDIDKVTDAQRKKAKQANFGIIYGITTYGLAQRMGIPNGEARELI
QDYFHTFPKVKAYMEQAKETARAKGYAETLFHRRRYLPDINSRNATVRGFAERNAINAPI
QGTEADIIKVAMVRIWKRFKEEGIRSKMILQVHDELNFSVYPEEREQVERIVIEEMQNAC
QLNVPLTADAGWGSNWLEAH
NT seq 2763 nt   +upstreamnt  +downstreamnt
atggcaaaactcttcctcctcgacgcatacgcactcatctatcgttcgtattacgcattc
ctcaggactccccgcatcaattccaaaggactgaacacttcggccatcatgggattctgc
aataccttgaacgaagtgctgacaaaggagcaccctacacatatcggcgtagctttcgac
catggaaagaccttccgccacgaagttttcccggcctacaaggcacagcgcgaggaaacg
ccggaagacatcagacagtcagttcccatcatcaagcagattctcgaggcgatgcgcatc
cctattctgcaggtagacggcttcgaagccgacgatgtcatcggaaccgttgccacccgg
ttcggcaccgatggaatcgatactttcatgcttaccccggacaaagactacgggcagctg
atcgggccgagggtctttatcttccgtccacgtcatggaggcggctatgagacgctgggt
gaaaaagaagtggaatcgaagtatggcattcctaccccagcccaggtaatcgaccttctg
gcactgatgggtgactcggcagacaatttcccaggctgtccgggtgtcggagagaaaaca
gctgctaaactgatcaaccagttcggctccatcgacaacctgctccggcacacagatgaa
atcaaaggaaagctgcgcgacaaaatcgagaatgctgtcgaagacataaaaatgtcaaag
ttactcgcaaccatccgtactgatgttccgctacagcttagtctggatgaactgaaggta
gagcagcccgatgaagtcaaattacgcagaatcttcgaagaactggagttcaagacactt
gccaacaaacttcttaacaaaagtgaattaaaaccgaaaaatgtagaaacacagctcgat
ctcttttccgtaaacacacccagaggacaggaagaactggaaaaaacgaattatgaaacc
cataaaacagtgccacatgaatataaactcattgacaatgaggaagaaatggaccggctt
tgtgacttttttatgacaaaagaatttgtcagtatagacacggagaccacttctaccgat
gcgatcagggccgagttggtaggtctgagcttctctgtcgaagaaaacaaggcgttttat
gtgcctcttcccgccaaccgtgaagaggcgttaaaatatgtccggatattcaaacccttg
tatgagaacgacaatatcctgaaaatcggccagaacatcaaatacgactacgaggtactt
aacaactatggggtgacactccaggggaagatgttcgacacaatgatagcccattatctc
atccagccggaactccatcacaacatggactatatggcagaaacgctgctcggctaccgg
accatccacattgaagagctgatcggtccgaaagggaagaagcagaagaatatgcgcgac
ctctctcctactgacatctgtgaatatgcagcagaggatgccgacatcaccttgcgcctg
aagcacctactcgaaccacgcctgaaagaactgggcttggaagaactcttctggaacatc
gagatgccgctcgtccgggtacttgctgacatggaactgaacggtgtctgcctggatacg
gaagccctgcaggaaacgtcaagaatattcaccgaccgcatgaagcagtatgaacaggaa
atatacaaggaagccggtgagacattcaacatcggaagtccgaaacaagtaggcgacatc
ctcttcggcaagctgcagatcatggacaaacccaagaagaccaagacaggacaatacgtc
acgagtgaagaagtcctgcaaagccttgaagccaaacatcctgtcgtacgtaacatcctc
aattacagagggatgaaaaagctgctcagcacctatatcgatgcacttccgaaactgatt
aacccacggacagggcatattcacacgtcgttcaatcaggcacagactgcaaccggccgt
ctctcctccagcgaccctaacctgcagaacatccctgtgcgcaccgatgacggcaaggag
atacgcaagtgcttcataccggaagacggctgtctgttcttttcagcagactacagtcag
atagagctgcgcatcatggcacatctgtcaggcgacgagaacatgatggaggcattccgc
gaaggacacgacatccaccgtgcaacagcggcgaagatatggcatgaagacatcgacaag
gtgacggatgcccagcggaaaaaggccaaacaggccaatttcggcatcatatacggcatt
acgacttatggccttgcccagcgcatgggcattccgaacggcgaggcgagagagctgata
caggactatttccacactttcccgaaggtgaaagcctacatggaacaggcgaaagagacg
gcaagagccaaaggatatgccgagacacttttccatcgccgacgttacctgcccgacatc
aacagccgcaacgccaccgtacgcggcttcgcagaacggaatgccatcaatgcgccgata
cagggaacagaggccgacatcatcaaagtggcgatggtccgcatctggaaacggttcaag
gaggaaggtatccgctcgaaaatgattctgcaggtacacgacgagctcaacttctcggtc
tacccggaagagcgggaacaggtggaacggattgtcatcgaagaaatgcagaacgcctgc
caactgaacgttccgctgacagccgatgccggatggggcagcaactggctggaggcacat
taa

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