Prevotella denticola: HMPREF9137_0650
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Entry
HMPREF9137_0650 CDS
T01459
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pdn
Prevotella denticola
Pathway
pdn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF9137_0650 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdn03019
]
HMPREF9137_0650 (pnp)
03016 Transfer RNA biogenesis [BR:
pdn03016
]
HMPREF9137_0650 (pnp)
Enzymes [BR:
pdn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HMPREF9137_0650 (pnp)
Messenger RNA biogenesis [BR:
pdn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HMPREF9137_0650 (pnp)
Transfer RNA biogenesis [BR:
pdn03016
]
Prokaryotic type
tRNA degradation factors
HMPREF9137_0650 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AEA20416
LinkDB
All DBs
Position
complement(763460..765715)
Genome browser
AA seq
751 aa
AA seq
DB search
MNVITKTVQLPDGRTISIETGKVAKQADGAAVLRMGNTVLLATVCAAKEAVPGTDFMPLQ
VDYREQYSAAGRYPGGFTKREGKANDDEILTSRLVDRVLRPLFPSDYHCEVYVQVMLLSA
DSVDQPDALAGFAASAALAASDIPIEHPTSEVRVARINGEYVIDPTFEQMKEADMDLMVG
ATKDNIMMVEGEMDEVSEQDLIGALKAAHEAIKPMCEMQEELSKACGTDVKREYDDEIND
EELREQVRKETYDACYAEAQSGDNDKKHREETYEKIKADFTEAYDAAHTDLSEDDLEEKH
AEIDRYFADVQRDSMRRSVLDTGKRMDGRATDEIRPIWCEVDTLPMPHGSALFQRGETMS
LSTCTLGTKMDEKMVDNVLEKSYQRFLLHYNFPPFCTGEAKAQRGVGRREIGHGHLAWRA
LKGQIPADFPYTVRLVSQILESNGSSSMATVCAGTLALMDAGVPMKKPVSGIAMGLIKNP
GEDKYAVLSDILGDEDHLGDMDFKTTGTRDGLTATQMDIKCDGLSFEILEKALMQAKAGR
EHILNLLTDTIAEPRAEMKPQVPRIVQLEIPKEFIGAVIGPGGKIIQQMQEDTGATITIE
ETDGVGKVQVSAPNKDSIDAALGKIKSIVAVPEIGEVYEGTVRSIMPYGCFVEILPGKDG
LLHISEIDWKRLETVEDAGIKEGDKIKVKLLDIDPKTGKYKLSRRVLLEKPEGYVEPQRR
PRGDRRPRRDGERRHDDRRPHREFSDNESND
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaattacgaaaacagttcagttgccagatggaagaaccatctcaattgaaacc
ggaaaggttgcaaagcaggctgacggcgcagcggtcctccgcatgggaaacaccgtactt
ctcgccactgtttgtgcagccaaagaggcagttccgggcacagacttcatgcctttgcaa
gttgattatcgcgagcagtattctgccgcaggtcgttacccaggcggtttcaccaaacgc
gaaggcaaagccaatgacgacgaaatccttacatcacgccttgtggaccgtgttctccgt
ccacttttcccatcagattaccactgcgaggtctatgtacaggtcatgctgctgtcggcc
gacagcgtagaccagcctgacgcccttgcagggtttgcagcatccgcagcactggctgca
tcagacatccccattgaacaccccacctccgaagtccgcgtagcccgcatcaacggcgaa
tacgtcatcgatcctaccttcgagcagatgaaggaggcagacatggacctcatggtcggt
gccaccaaggacaacatcatgatggtagagggtgagatggacgaggtttccgagcaggac
ctcatcggcgctttgaaggcagcgcacgaggccatcaaacctatgtgcgagatgcaggaa
gaactttcaaaggcctgcggtacggacgtgaagcgcgagtacgacgatgagatcaacgac
gaagagctgcgcgaacaggtacgcaaggagacctacgacgcctgctatgccgaggcacag
agcggcgacaacgacaagaagcaccgcgaggagacctacgagaagatcaaggcagacttc
accgaggcatacgatgcggcccacacagacctttcagaagacgacctcgaagaaaaacac
gcagaaatcgatcgttactttgcagacgtacagcgcgactccatgcgccgcagtgtcctc
gacaccggcaagcgtatggacggccgtgcaacagacgagatacgtcctatctggtgcgag
gtagacacgctgccgatgccccacggaagtgcgctcttccagcgtggcgaaaccatgtcg
ctctctacctgtaccctcggtacgaagatggacgagaagatggtcgacaacgtactggag
aagagttatcagcgtttcctcctccactataacttcccgccgttctgtaccggtgaggcc
aaggcacagcgcggcgtaggccgccgtgagatcggccacggccatctggcatggcgtgcg
ttgaaaggacagattccggccgacttcccctacaccgtccgtctggtaagccagattctc
gagtccaacggctcgtcttccatggccaccgtatgtgccggcacactggcattgatggat
gccggtgtcccgatgaagaaaccggtatcaggtatcgccatgggtctgatcaagaacccg
ggcgaggacaagtatgccgtactgagcgacatcctcggcgatgaggatcacctgggcgac
atggacttcaagacgaccggtacacgtgacggcctgacggcaacgcagatggacatcaag
tgcgacggtctgtcgttcgagattcttgagaaggcactcatgcaggccaaggccggccgt
gagcacatcctcaacctcctgaccgacacgatcgcagagccgcgtgcagagatgaagccg
caggttccacgcatcgtacagctggagattcccaaggagttcatcggtgccgttatcggc
cccggcggcaagatcatccagcagatgcaggaagacacgggtgccacgatcaccattgag
gagaccgacggtgtcggcaaggtacaggtgtcagcccccaacaaggattcgattgatgct
gccctgggcaagatcaagtcgattgtcgccgtaccggaaatcggtgaagtctacgaggga
acggtacgttccatcatgccttacggctgcttcgtagagatactgccgggcaaggacggc
ctgctccacatctcggagattgactggaaacggctcgagaccgtagaagacgcaggcatc
aaggagggtgacaagatcaaggtcaagctcctcgacatcgacccgaagaccggcaagtac
aagctctcacgccgtgtactgctcgagaagccggaaggctatgtagagccgcagcgccgg
ccacgtggcgaccgccggccacgccgtgacggtgagcgtcgccatgacgaccgccgtccg
caccgcgagttcagcgacaacgaaagcaacgactga
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