Prevotella denticola: HMPREF9137_0731
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Entry
HMPREF9137_0731 CDS
T01459
Name
(GenBank) TonB-linked outer membrane protein, SusC/RagA family
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
pdn
Prevotella denticola
Brite
KEGG Orthology (KO) [BR:
pdn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdn02000
]
HMPREF9137_0731
Transporters [BR:
pdn02000
]
Other transporters
Pores ion channels [TC:
1
]
HMPREF9137_0731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
TonB_dep_Rec_b-barrel
CarboxypepD_reg
CooC_C
TTR_TEN1-4
Big_1
Motif
Other DBs
NCBI-ProteinID:
AEA21221
LinkDB
All DBs
Position
874982..878047
Genome browser
AA seq
1021 aa
AA seq
DB search
MKQVKCKFPVRILTLLLGLFLSVSAFAQSTVTGQVKDAAGEPVIGASVLINGTSNGTVTD
LDGNFSVNVQPGATLTISYIGYQKQQVAASNGMVVTLKEDVAQQMNEVVVIGYGAVKKSD
LTGSVTALKPDGKNKGLVVNAQDMLAGKVAGVSVTNDGGTPGGGSNIRIRGGSSLNASNS
PLIVIDGVAMDQTGVKGVANPLSLVNPQDIESFNVLKDASATAIYGSRGSNGVIIITTKK
GRRGMQISYNGSFTVSTKSKNLDVLSADEYRDLIKSKYGTALYTLDANGNEVPTAYGSLG
KANTNWQNEIFRTAIGHDHNVAVSGQAANWLPYRVSAGYTNQQGIVKTSSFERFTGALTL
SPSLLNDHLKVTLNAKGMWTKNRYADGEAIKAARQFDPTQPVYADGFNNFGGYYQWTDDG
TALNDPTWPMTFYSLATKNPVSILNLKNDRAISRDFLGSADIDYKVHGFEDLRLHVTAGL
DVAKGRQVTDVDPASPLAVYYGSYGWESQLKRNMQLSAYAQYYHDFNDKAKNHFDIMAGY
EWAHFWHNTHNSYWSFYPSTNKDTSLAGKERNRSYYNYATENYLVSFFGRANWSLMDGRY
MVTATVRDDGSSRFQDHWAVFPSFAFAWRMNEENMLKQIDWLSDLKLRLSWGMTGQQEGI
GDYNYFAVYEMNTGNDSYYPIAGDGSLARPKAYDPTLKWETTTSYNIGLDWGVLRQRLSG
TVDWYYRKTSDLLNKATVSAGSNFRNEVMSNIGSMYNTGVEASIHWLAVNSKDINWTMDY
NFTYNYNKITDLNGGSDPDYYVPTGGISAGTGGNIQAQHVGNAVNSFHVFQQAYDKNGKP
LEGVVVDRNGDGKITDADKYYYKKPAAPVTMGFASRLEYHNWDLGFALRASIGNYVYNDA
FASTSNMSTSDLFPKGKFLVNRPSEVVGDNWLSNDPTSTQSDYWVQNASFLKMDNVTLGY
SFANLLKQGSWNGISGRIYGTVNNVFCITKYKGLDPEVFNGIDNNLYPRPISFILGLNLN
F
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaggtaaaatgcaaatttcctgtcaggatactgacccttttgctggggctgttc
ctttcagtcagtgcttttgcacagtctactgttactggacaggtgaaggatgctgccggc
gagcccgtcattggtgcttccgtccttatcaacgggacatccaacggtacggtgaccgac
cttgacggtaacttctctgtcaacgtacagcccggtgcaaccttgacaatctcctacatt
ggttatcagaagcagcaggtcgctgcatccaatggcatggtcgtcacgctcaaggaagac
gtggcacagcagatgaacgaagtcgtcgtcatcggttacggtgctgtgaagaagagcgac
cttaccggttctgtcacggctctgaagccggacggcaagaacaagggcctggttgtcaat
gcgcaggatatgctcgccggcaaagttgccggtgtgagcgtcaccaacgacggcggtacg
ccgggtggcggttctaacatccgtatccgtggcggttcgtcactgaatgcttccaacagt
ccgttgattgtcatcgacggtgtggctatggaccagactggtgtcaagggtgtggccaat
ccgctctctctcgtcaatccgcaggatattgagtcgtttaacgtcctgaaggatgcttcc
gctacagctatctacggttcacgtggttcgaatggtgtcatcatcatcaccaccaagaag
ggtcgtcgcggtatgcagatttcttataacggcagctttaccgtcagcacgaagtcgaag
aaccttgacgtgctgtcggctgatgagtaccgtgacctgataaagagcaagtacggtacg
gcactgtacacgctggacgctaacggtaacgaggtcccgacagcttacggaagcctgggc
aaggccaataccaactggcagaacgaaatcttccgtaccgccatcggccacgaccacaac
gtagctgtgtccggtcaggctgccaactggctgccttaccgtgtcagtgcgggatatacc
aaccagcagggtatcgtcaagacctccagcttcgagcgtttcacgggcgccctgacatta
agcccttctctcctgaacgaccatttgaaggtcaccctgaatgccaagggcatgtggacc
aagaaccgctatgctgacggcgaggccatcaaggctgcacgtcagttcgacccgacacag
cctgtctatgcagacggtttcaacaacttcggtggttattaccagtggacggatgacggt
acagccctcaacgatccgacatggccgatgacattctattctctggcaaccaagaacccg
gtgtctatcctcaacctgaagaacgaccgtgccatcagccgcgacttcctcggcagtgct
gacatcgactataaggtacacggctttgaggacctgcgcctccacgtgacggcaggcctt
gatgttgcaaagggacgccaggtaacggatgtcgacccggcttccccactggctgtctat
tatggctcatacggctgggagtcacagttgaagcgcaatatgcagctgtctgcttacgca
cagtactaccacgacttcaacgacaaggccaagaaccactttgacatcatggccggctac
gagtgggcacacttctggcacaacacccataattcttactggagcttctatccttcgacg
aacaaggacaccagccttgccggcaaggagcgcaaccgcagttactataactatgcgacg
gagaactacctcgtttctttcttcggccgtgccaactggtctctgatggatggccgctac
atggtgacggcaacagtacgtgacgacggttcttcccgtttccaggaccactgggctgta
ttcccgtccttcgctttcgcatggcgcatgaacgaagagaacatgctgaagcagatcgac
tggctgtccgacctgaagctccgcctcagctggggtatgaccggtcagcaggaaggtatc
ggcgactacaactacttcgctgtgtacgaaatgaacacaggcaacgactcttactatcca
attgccggtgacggctctctggcccgtccgaaagcgtatgaccctacactgaagtgggag
acgaccacctcttataacataggtcttgactggggtgtcctcaggcagcgtctttccggt
accgtcgactggtactaccgcaagaccagcgaccttctcaacaaagcgaccgtatcggcg
ggatccaacttccgcaacgaggtgatgagcaacatcggatcgatgtacaacacgggtgtc
gaggcaagcattcactggctggccgtgaactccaaggacatcaactggacgatggattac
aacttcacctacaactacaacaagatcaccgacctcaacggtggttctgaccctgactat
tacgttcctacaggcggtatctctgccggcacaggcgggaacatccaggcgcagcacgta
ggcaatgcagtcaattctttccacgtgttccagcaggcatacgacaagaacggaaagcca
ctggagggtgttgtcgtagaccgcaacggcgacggcaagatcaccgatgcagacaagtac
tactacaagaaaccggcggctcctgtcaccatgggctttgcttcccgcctcgagtaccat
aactgggatctcggcttcgcactccgtgcaagcatcggcaactatgtctacaatgacgct
tttgcaagtacttccaacatgtcgacttcggatcttttcccgaaaggcaagttccttgta
aaccgtccttcagaagttgtgggtgacaactggctgtcaaatgatccgacctcaacacag
agtgactactgggtacagaacgcttccttcctgaagatggacaacgtgacactggggtac
agctttgcgaaccttctcaagcagggttcatggaacggtatctcgggccgtatctacgga
actgtcaacaacgtgttctgcatcaccaagtataagggcctcgacccggaggtgttcaac
ggtattgacaacaacctctatccgcgtcctatctcgttcatcctggggttgaacctgaat
ttctaa
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