Prevotella denticola: HMPREF9137_0788
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Entry
HMPREF9137_0788 CDS
T01459
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pdn
Prevotella denticola
Pathway
pdn00470
D-Amino acid metabolism
pdn00550
Peptidoglycan biosynthesis
pdn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HMPREF9137_0788 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HMPREF9137_0788 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdn01011
]
HMPREF9137_0788 (murD)
Enzymes [BR:
pdn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HMPREF9137_0788 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pdn01011
]
Precursor biosynthesis
Amino acid ligase
HMPREF9137_0788 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD_N
MurD-like_N
AlaDh_PNT_C
TscT
3HCDH_N
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
AEA20799
LinkDB
All DBs
Position
complement(948863..950194)
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AA seq
443 aa
AA seq
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MKRIVILGAGESGAGAAVLAKKEGFDVFVSDMSAIKDKYKKLLDNHGIEWEEGHHTEEKI
LNADEVIKSPGIPKEAPMIRKLMEQGTHIISEIEFAGRYTDAKMICITGSNGKTTTTSLI
YHIFTNAGYDAGLAGNIGNSLALQVAEDPHEYYIIELSSFQLDNMYDFRANIAILLNITP
DHLDRYDYKFENYADAKMRIIQNQTAEDSFIYWNDDPVIKKELEKFDVHAVCYPFSELKE
NGSIGYIEEGQYKIEKPEPFNMEQEDLSLTGRHNIYNSLAAGIASDISGIKKENIRKSLG
DFPGVEHRLEKVCKVAGVQYINDSKATNVDACWYALESMRTPTILILGGKDKGNDYNAIK
DLVKEKCTGIVYLGADNRKLHENFDGLGIPVRDTHSMKDCVAACTEMAKPGDTVLLSPCC
ASFDLFKNMEDRGDQFKSLVRAL
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatcgtaatattgggtgccggcgagagcggagccggtgcagccgtactggca
aagaaggaaggattcgatgtgttcgtttccgatatgtccgccatcaaggacaaatacaag
aagctgctcgacaaccatggcatcgaatgggaagaggggcaccatacggaagagaaaatc
ctcaatgccgacgaggtcatcaagagcccgggcattcccaaagaagccccgatgatcaga
aaactcatggaacagggcacacacatcatcagcgagattgaattcgccggccggtatacc
gatgccaagatgatctgcatcacgggcagcaatgggaaaacgaccacgacaagcctcatc
tatcatatcttcacgaatgcaggctatgatgccgggctggccgggaacatcggcaacagc
cttgccctgcaggttgcagaagacccgcacgaatactacatcatcgagctgagcagcttc
cagctggacaatatgtatgacttccgcgccaacatcgccatcctgctcaacatcaccccg
gaccatctggaccgctacgactacaaattcgagaactatgccgacgccaagatgcgaatc
atccagaaccagactgccgaagacagcttcatctactggaacgacgaccctgtcatcaag
aaagaactggagaaattcgacgtacatgccgtatgctatcctttctcagaactgaaggag
aacggcagcatcggttacatcgaggagggacagtacaagatagagaagcccgaacctttc
aacatggagcaggaagacctctcgctgacaggccgtcacaacatctacaattcgctggca
gcaggcatcgcctcggacatcagcggcatcaagaaggagaacatacgcaagagcctgggc
gacttccccggcgtggagcaccggttggaaaaagtctgcaaggtggcaggcgtgcagtat
atcaacgactccaaggcgaccaatgtcgatgcctgctggtatgcactggaaagcatgcgc
acaccgaccatcctcatcctcggcggcaaggacaaaggaaacgactacaacgccatcaag
gacctggtgaaggaaaagtgtacaggcatcgtctatctgggtgccgacaacaggaaactg
cacgagaacttcgacgggctcggcattcccgtgcgcgacacccactccatgaaggactgc
gtggcggcctgcactgaaatggcaaagccgggggacacggtactgctgagtccctgctgt
gccagcttcgaccttttcaagaacatggaagaccgaggcgaccagttcaagagccttgtg
agggccttatag
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