Prevotella denticola: HMPREF9137_1033
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Entry
HMPREF9137_1033 CDS
T01459
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pdn
Prevotella denticola
Pathway
pdn00300
Lysine biosynthesis
pdn00470
D-Amino acid metabolism
pdn01100
Metabolic pathways
pdn01110
Biosynthesis of secondary metabolites
pdn01120
Microbial metabolism in diverse environments
pdn01230
Biosynthesis of amino acids
Module
pdn_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pdn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HMPREF9137_1033 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HMPREF9137_1033 (lysA)
Enzymes [BR:
pdn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HMPREF9137_1033 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AEA22071
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All DBs
Position
complement(1215030..1216187)
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AA seq
385 aa
AA seq
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MTNRFPTDKFKHIDTPFYYYDCNLLRETLQAIHEEVRTHADFIVHYAVKANANAKVLKII
SQAGMGADCVSGGEIRRCLDSGFPAGSIVYAGVGKADWEINLGLDHDIFCFNVESVAELE
VINSLAARKGKVANVCFRINPDVGAHTHKMITTGLAENKFGIAMQDMVPAIREAERMANI
RFIGLHFHIGSQILDMTDYRHLCSRINEIQNGLEEQDIRAENINVGGGLGIDYTQPDSKA
VPDFKAYFYTFARYLKLREGQKLHFELGRAVVGQMGSLITRTLYVKQGTAKQFAIVDAGM
TDLIRPALYHARHEIENLSSDGPEQIYDVVGPICESSDVFAKDIPLNTVHRGDLIALRSA
GAYGEIMASQYNCRRLPVGYLSDEL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacagatttccgacagacaagttcaagcatatcgatacccctttctactattac
gactgcaacctccttcgggagactctgcaggcaatccatgaagaagtgaggacacacgca
gactttatcgttcactatgctgtcaaggccaatgccaacgcaaaggtgctgaagataatc
agccaggcaggaatgggggccgactgtgtgagcggaggcgagatacgacgctgtctggac
agtggcttccctgcgggcagcattgtctatgccggcgtggggaaggcagactgggaaatc
aatctcgggctcgaccacgacatcttctgcttcaatgtggagagcgtcgccgagctggag
gtcatcaacagtctggctgcgaggaaagggaaagtggcgaacgtatgcttccgcatcaac
ccggatgtaggagcgcatacgcataagatgattacaaccggactggcagagaacaagttc
ggaatcgccatgcaggacatggtgccggccatccgggaggcggaaaggatggcgaacatc
cgctttatcgggctgcacttccacatcggttcacagattctcgacatgacggactaccgc
catctgtgcagccggatcaacgaaatacaaaacggtctggaggagcaggatataagggcg
gagaacatcaatgtaggcggcggactgggcatcgactacacacagccggacagcaaagca
gtacccgacttcaaagcttacttttacacctttgcccgctatctgaaactgcgggaggga
cagaagctccactttgagctgggacgtgccgtcgtcggacagatgggaagcctcatcacc
cgtacgctctacgtaaaacagggaacggcaaagcagttcgccatcgtggatgccggcatg
accgacctcatccgtcccgccctctaccatgccagacatgagatagaaaatctgtcgagc
gatggaccggaacagatctatgacgttgtgggtcccatctgcgagtcaagtgatgtcttc
gccaaggacatcccgctgaataccgtccaccggggcgacctgattgcgcttcggtcggcc
ggggcatacggcgaaatcatggcttcgcaatacaactgccgccggctgcctgtcggctac
ctgtctgacgaactttaa
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