Prevotella denticola: HMPREF9137_1207
Help
Entry
HMPREF9137_1207 CDS
T01459
Name
(GenBank) MutS2 family protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
pdn
Prevotella denticola
Pathway
pdn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HMPREF9137_1207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdn03400
]
HMPREF9137_1207
DNA repair and recombination proteins [BR:
pdn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HMPREF9137_1207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
SHOCT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEA19956
LinkDB
All DBs
Position
complement(1410413..1413121)
Genome browser
AA seq
902 aa
AA seq
DB search
MIYPKNFEQKIGFTEIRTLLRERCLSPLGKERVDEMSFSTDAGQINTWMEEIREFRRIQE
GQDDFPLDNFFDVRESVSRIRLEGTHMEVEELFDLKRSLETIIAIVSFLSRGEETEQGEI
RHYTPALYALADGIATFPILVQRISQIIDKFGKMRDNASPDLLQIRRELSQTEGSISRTL
YSILHSAQAEGLVEKDVSPTLRDGRLVIPVAPGLKRRISGIVHDESATGRTVYIEPSEVV
EANNRIRELENEERREIIRILTEFAKKMRPNVPEILDSYSLMAAVDFIRAKAELARLFRS
FEPEVSDKPHIDWIRAVHPLLQLSLERKSRKDANRLSLTDNSHADKDSNDEISLQEDNIL
SEEEYKTGNVPPSVVPLDIQLTKDKHLLIISGPNAGGKSVCLKTVGLLQYMLQCGLSIPV
GDRSTTGIFTDIMIDIGDEQSIENDLSTYSSHLMNMKIMMRHATEHTLILIDEFGTGTEP
QIGGAIAEAVLRQFWKKHVWAVITTHYQNLKHFAENHPGTANGAMLYDRHEMRPLFQLAI
GRPGSSFAIEIARKTGIPEEVIHDAADIVGSDYIQSDKYLQDIVRDKRYWESKRQTIHSH
EKELEKRIAQYEKDIATLEQSRKDILRRAKEQAEEIIKESNRRIENTIREIREKQAEKEE
TKRIRQELAAYEEGLQSSSQLDKPGKNNKKKMKDSGLLSDEDFQKKVDKIKSRKERHEQH
LKERAGKQQAAAEALKNAVRKQQTSGVVNVGDAVRIKGLTTIGKVEAIDGKQATVIFGDM
RTKMAMSRLEHVDAASLQTEQQQFQAYNYSRETRETIDKHRNQFHQELDVRGMRADEALN
QVQYFIDDAILVGAGQVRILHGKGNGILRQLIRQYLASIPNVKSYRDEHVQFGGAGITVV
EL
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgatatatcccaagaacttcgaacagaaaatcggtttcaccgaaataagaaccctcctc
cgagaacgctgcctgtcaccattgggcaaggagcgggtagacgaaatgagcttttccaca
gatgccggacagataaacacatggatggaagaaatcagggagttccgccggatacaggag
ggacaggatgattttccgctggacaacttcttcgacgtacgcgaaagcgtgtcaagaata
cggctggaggggacacacatggaagtggaggaactgttcgatctgaagcgttcactggag
accatcattgctatcgtcagcttcctgagccgtggagaagaaaccgaacaaggagagata
cgccactacactcccgccctctatgcgcttgcagacggtattgcaacctttcccatactt
gtacagcgcatctcacagatcatcgataaattcggcaagatgcgtgacaatgcatcaccc
gacctgctgcagattcgccgggaactttcccagacggaggggagtatctcacggacgctt
tacagcatcctgcattcggcacaggcggaaggacttgtcgagaaggacgtctcgcctacc
ctgcgcgacgggcgactggtcatccccgtcgccccaggcctgaaacgaagaatatcaggt
atcgtccatgatgaaagtgccaccggacgcactgtgtacattgaaccttccgaggttgtg
gaagccaacaacagaatccgagaacttgaaaatgaggaacgccgagaaatcatccgcatc
ctcacagagtttgccaaaaagatgcgtccgaacgtgccggaaatcctcgattcatacagc
ctcatggcggcagtagacttcatccgtgcaaaagccgaacttgccaggctcttccgaagc
tttgagccagaggtgagcgacaaaccacatatcgactggataagggctgtacatccgctc
ttacagctgtctttggagcgcaaaagcaggaaagatgcaaatcgtctgtcattaacggac
aacagccatgcggataaagactcaaatgacgagatttctctacaggaagacaatatccta
tcggaagaggagtataagacagggaacgtacccccatctgtggtcccgcttgacatacag
ctcaccaaggacaagcatctgctgattatctccgggcctaatgccggtggcaaatcggtc
tgtctgaagacggtgggactgctgcaatatatgctccaatgcgggctgtccatccctgtc
ggcgaccgttccacgacagggatctttacggacatcatgattgacatcggcgacgaacag
agcatcgagaacgacctcagcacctattcctctcacctgatgaacatgaaaatcatgatg
cgccatgctaccgaacacacgctcatccttatcgacgagttcggaacaggcaccgagccg
cagatcggcggtgccattgcggaggcggtcctgcgccagttctggaagaaacacgtctgg
gcggtaatcacgacgcactatcagaatctcaagcacttcgccgaaaaccatcctggaaca
gccaacggtgcgatgctctacgaccgccatgagatgcgcccgctcttccagctcgccatc
ggaagaccgggcagttcgttcgccatcgagattgcccggaaaacaggaatacccgaagag
gtaatccatgatgcagcagacattgtcggttccgactatattcagagtgacaaatatttg
caggatattgtcagggacaaacgttactgggagagcaaacggcagaccatccacagccat
gaaaaggagctggagaagcggattgcacagtatgagaaggacatcgccacactggaacaa
agccgcaaggacattctcagacgggcaaaggaacaggctgaggaaatcatcaaggagagc
aaccggcgtatagaaaacaccatccgtgaaatcagggagaagcaggccgaaaaagaagaa
accaagcgcatacggcaggagcttgcagcctacgaggagggcttgcagtcttcaagtcag
cttgacaaacccggaaaaaacaataaaaagaagatgaaggacagcggactgctgtcagat
gaggacttccaaaagaaagtcgacaaaataaagagccgcaaggaacggcacgaacaacac
ctgaaagaaagagccgggaagcagcaggcagccgccgaagcactgaagaatgcggtgcgg
aaacagcagacgagcggtgtggtgaatgtaggtgatgccgtaaggataaaaggtcttacg
accatcgggaaggtagaggctatcgatggaaaacaggcgactgtcatctttggcgatatg
cgaacaaagatggccatgagccgtctggagcacgtagatgctgcctccctacaaacggaa
cagcaacagttccaggcatataattacagccgcgagacccgtgagaccatcgacaagcac
cgtaaccagttccatcaggagctcgacgtacggggcatgagagctgacgaggccctgaac
caggtgcaatacttcatcgatgatgccatccttgtgggagctggacaggttcggattctc
catggaaaaggcaatggcatactgcgccagctcatccgccagtatcttgccagcataccg
aatgtaaaaagctatcgtgatgagcatgtacagttcggcggtgctggcatcacagttgtg
gaactgtga
DBGET
integrated database retrieval system
