Prevotella denticola: HMPREF9137_1543
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Entry
HMPREF9137_1543 CDS
T01459
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pdn
Prevotella denticola
Pathway
pdn03030
DNA replication
pdn03430
Mismatch repair
pdn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF9137_1543 (holA)
03430 Mismatch repair
HMPREF9137_1543 (holA)
03440 Homologous recombination
HMPREF9137_1543 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdn03032
]
HMPREF9137_1543 (holA)
03400 DNA repair and recombination proteins [BR:
pdn03400
]
HMPREF9137_1543 (holA)
Enzymes [BR:
pdn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF9137_1543 (holA)
DNA replication proteins [BR:
pdn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMPREF9137_1543 (holA)
DNA repair and recombination proteins [BR:
pdn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMPREF9137_1543 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
PTA_PTB
Glycos_transf_2
Motif
Other DBs
NCBI-ProteinID:
AEA21217
LinkDB
All DBs
Position
complement(1793957..1794982)
Genome browser
AA seq
341 aa
AA seq
DB search
MPAKQGTTFQHIMQDLKSRRFAPVYMLMGDEAYYIDLISDYIADHVLSPEERDFNQTICF
GSDVTAVQVADMARRYPMMAEYQVIIVKEAQNVRSLEALEKYLKNPVKSTILVWCHKNGK
IDARKKAIGLAQAVGVVFESKKLRDYQLPDFIQGYLKKKNVSIDPKACQMIADHIGTDLS
RLASELDKVLISLPEDHLRVTPEVVEREIGVSKDFNAFELRNAIIQKDSFKANQIVKYFD
SNPKAGSLYSFLPLLFSYFQNLMIVHYAPRRNSEQDIAGALDLRNTWGVRDYMIGLKNYS
ARKTMDIISKLRDIDGKSKGLDNPNTGVGDLMKELVFFILH
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaaagcaaggaacaacatttcagcatattatgcaggatttgaagagccgtagg
tttgctccagtctatatgctgatgggagatgaggcctattacatcgatctgatttctgac
tatattgcagaccatgtcctttctccggaagaacgcgatttcaaccagaccatctgtttc
gggtcggatgttacggctgtccaggtagctgatatggcgcgtcgttatcccatgatggca
gaatatcaggtgattattgtcaaggaagcgcagaatgtccgctctttagaggccttggag
aagtatctcaagaatcctgtaaaatcaaccatccttgtgtggtgtcataaaaatgggaaa
attgatgcgcgcaagaaagccatcggattggcgcaggctgtcggtgtcgtctttgaaagc
aagaagctgcgcgactatcagcttcctgattttatccaaggttatctgaaaaagaaaaat
gtcagcatcgaccccaaggcgtgccagatgatagccgaccatatcgggactgatctcagc
cgtctcgcctccgagttggacaaggtgctcatctcgcttccggaagaccacctccgggtg
acaccagaggtggtggagagggagataggggtaagcaaggatttcaatgcttttgagctg
aggaatgccatcattcagaaggacagtttcaaggctaatcagattgtgaaatattttgac
agtaatccaaaagccggatctctttattctttcctcccattgctcttttcctatttccag
aatctgatgattgttcattatgcaccccggcggaactcggaacaggacattgcgggagca
ttggatttacgtaatacctggggagtgagggattacatgataggcctgaaaaactattca
gcacgtaaaacaatggatataatttccaagctacgggatattgatggaaagagtaaagga
ctggataatcctaatactggagtaggagatttgatgaaagaacttgttttcttcattctt
cattaa
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