Prevotella denticola: HMPREF9137_1880
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Entry
HMPREF9137_1880 CDS
T01459
Name
(GenBank) permease, YjgP/YjgQ family
KO
K07091
lipopolysaccharide export system permease protein
Organism
pdn
Prevotella denticola
Pathway
pdn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pdn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HMPREF9137_1880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdn02000
]
HMPREF9137_1880
Transporters [BR:
pdn02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
HMPREF9137_1880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
DUF2207_C
DUF3376
Motif
Other DBs
NCBI-ProteinID:
AEA20066
LinkDB
All DBs
Position
2179884..2181821
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AA seq
645 aa
AA seq
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MMFRIRKLDIFIARQFGMLFAGTFFISLFVLMMQFLWRYVDDLIGKGLSMDVLGQFFWYM
SLMMVPQALPLAILLSSLISYGNLGESSELTAIKSAGISLVQSFRGLIVISVLIACGSFY
FQNNVGPSAQKHIAQLLISMKQKSPELEIPEGIFYDGIPNTNLYVEKKDLKTGHLYNIMV
YRMTDSYEDQAIILADSGMLQSTAEKKHLVLNLWSGEWFENMRSQEMGSSASVPYRRETF
THKHIVLDFDGDFNLTDMAGISNDARTKSITKIQHDKDSLVHVYDSVGKAYYKDAQSIYY
PSPRLRPSEMKQAVRLAEGKSFNVDSMFSRLPADQRRQVVDQALSTVQQEVGDLEFKSLV
TSDGDKLIRLHDIETINKFTLSLICIIFFFIGAPLGAIIRKGGLGIPIIISVIVFIIFYI
LDNTGYRMSRQGDWAIWFGKGLSMAVLIPMAVFFTYKANNDSAVFNADMYMNLLRRMFGL
RLKRSIAGKEVILNDPAYSRDAARLRLLNGQIAEYAKSRSLKSPPDVIKVFFRYHADHVI
ENISDELEAVIEDLGNTRNKLIMTVLNRYPILAVKAHTRPFDRRWLNILAGLILPAGIFF
YFRMWRFRLRLYRDLRAITACNDVLIAEIERMERVAFGLHKKKHS
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcggatcaggaaattagacatattcatagccaggcagttcggcatgctcttc
gccgggacattcttcatcagtctgttcgtgctgatgatgcagttcctgtggcggtatgtc
gacgacctgatcggcaagggactgtccatggatgttctcggacagttcttctggtacatg
agcctgatgatggtgccgcaggccctgccgctggccatcctcctctcctcgcttatttcc
tacggcaacctcggcgagagttccgaactgacggccatcaagtcggccggcatctcgctg
gtccagtcgttccgcggcctgatcgtcatcagtgtcctcatcgcctgcggttcgttctat
ttccagaacaatgtagggccgagcgcgcagaagcacatcgcccagctgctcatttccatg
aagcagaaaagtccggagctggagatacccgaaggcatcttctatgacggcatccccaat
accaacctctatgtggagaagaaagacctgaagaccggacacctctataacatcatggtg
taccggatgaccgacagctacgaggaccaggccatcatccttgccgattcgggcatgctc
cagtcgacggcagagaagaagcacctcgtgctgaacctgtggagcggagagtggttcgag
aacatgcgctcgcaggagatgggcagcagtgccagcgttccttaccgccgggagacgttc
acccacaagcacatcgtgctcgactttgacggcgacttcaacctcaccgacatggcgggc
atctcgaacgatgcccgtacgaagagcatcaccaagatacagcacgacaaggactcgctg
gtccacgtctatgacagcgtaggaaaggcctattacaaggatgcacagtcaatttactat
ccttcccccaggctccggccgtcagagatgaagcaggccgtcagactggcggaaggaaaa
agcttcaacgtcgactcgatgttcagcaggctgccggccgaccagcgccgccaggtcgtc
gaccaggctctgtctactgtccagcaggaggtgggcgacctcgagttcaagagtctggtg
accagtgacggcgacaagctgatccgtctgcacgacatcgagaccatcaacaagttcacg
ctgtcgctgatctgcatcatcttcttcttcatcggcgcaccgctcggtgccattatccgc
aagggcggactgggcataccgatcatcatcagcgtcatcgtgttcatcatcttctacatc
ctcgacaacaccggctaccgtatgtcccgccagggtgactgggccatctggttcggcaag
ggactgtcgatggcggtgctcatcccgatggcggtgttcttcacctacaaggcgaacaac
gactcggcggtgttcaatgccgatatgtacatgaacctgctgcggcggatgttcggactc
cgcctcaagcgcagcatagccggcaaggaagtaatcctgaacgacccggcctacagccgt
gatgccgcccggctccggctgctgaacgggcagatcgccgaatatgcgaagtcgcgcagc
ctcaaatcgccgcctgacgtgatcaaggtgttcttccgctatcatgccgaccatgtcatc
gagaacatcagcgacgaactcgaagccgtcatcgaagacctgggcaacacgcgcaacaag
ctcatcatgaccgtgctgaaccgctatcccatactggccgtgaaggcgcatacgcggcct
ttcgaccgccggtggctgaacatcctcgccgggctgattctcccggcaggcatcttcttc
tacttccgtatgtggcggttccgcctgcgtctctatcgtgacctccgtgccatcactgcc
tgcaacgatgtgctgattgccgagatagaacggatggagagagtcgcttttgggctgcat
aaaaagaaacattcataa
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