Prevotella denticola: HMPREF9137_2340
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Entry
HMPREF9137_2340 CDS
T01459
Symbol
kdsB
Name
(GenBank) 3-deoxy-D-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
pdn
Prevotella denticola
Pathway
pdn00541
Biosynthesis of various nucleotide sugars
pdn01100
Metabolic pathways
pdn01250
Biosynthesis of nucleotide sugars
Module
pdn_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pdn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HMPREF9137_2340 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pdn01005
]
HMPREF9137_2340 (kdsB)
Enzymes [BR:
pdn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
HMPREF9137_2340 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
pdn01005
]
Lipid A
HMPREF9137_2340 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
IspD
EcoRII-C
Motif
Other DBs
NCBI-ProteinID:
AEA20529
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Position
complement(2739883..2740800)
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AA seq
305 aa
AA seq
DB search
MCCKIACTYQRHLHHTDKFNTFKGNKSEIHFHFKKDLLFLCVLLPRKCDISNFKRIKESM
EFIGIIPARYGSSRFPGKPLAMLGGKTVIEHVYRQVSSVLTDVYVATDDPRIHNAVAAFG
GKSVMTRPDHKSGTDRICEALDKIGGSFDVVINIQGDEPFIQKSQIETVMQCFDDSRTQI
ATLGKPFETIEAAQNPNSPKIVLDNNGYALYFSRSVIPFVRGKATSEWLSTYPFLKHIGL
YAYRTEVLREVSRLPQSSLELAESLEQLRWLQNGYKIKVGLTDVETIGIDTPEDLQRAER
QLSAL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
ttgtgttgcaagattgcctgcacctatcaacgacaccttcatcataccgacaaatttaat
acttttaaaggaaataagtctgaaatacacttccattttaaaaaagatttgctatttttg
tgcgtacttctgccaaggaagtgtgacatatcaaactttaaaaggataaaggaatctatg
gaatttatcggaattatcccggctcgctacggctcttcacgttttcctggaaagcctctt
gcaatgcttggaggaaagaccgtcatcgagcacgtttacaggcaagtaagcagcgtgttg
acagatgtctatgtggccacagacgatccccgtattcataacgctgttgcagcgttcggc
ggaaagtccgtaatgacccgtcccgaccataaaagcggcacggacagaatctgcgaagca
ctcgataaaatcggtggcagcttcgatgtcgtcatcaacatccagggcgatgaacctttc
atacagaaaagccagattgagacagtcatgcagtgttttgatgattcacgcacacagatt
gccacgctgggcaagccttttgagaccattgaggctgcacagaatcccaattcgcccaag
atagtcctcgacaacaatggctatgccctttatttctcacgctccgtcataccctttgtt
cggggcaaggcgacttcggaatggctttccacctatcctttcctcaagcacatcgggcta
tatgcctaccgcacagaagtgctgcgtgaggtgagccgtcttccgcaatcctcgctcgaa
ctggccgaaagtctcgaacagctgcgatggctgcagaacggttataaaatcaaggtaggt
ctgacagatgtagagacaatcggcattgatacgccggaagacctgcaacgggcagagcgg
caattgtctgccctgtaa
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