Prevotella denticola: HMPREF9137_2448
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Entry
HMPREF9137_2448 CDS
T01459
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pdn
Prevotella denticola
Brite
KEGG Orthology (KO) [BR:
pdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdn03016
]
HMPREF9137_2448 (rnz)
Enzymes [BR:
pdn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
HMPREF9137_2448 (rnz)
Transfer RNA biogenesis [BR:
pdn03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
HMPREF9137_2448 (rnz)
Prokaryotic type
HMPREF9137_2448 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
AEA19931
LinkDB
All DBs
Position
2862013..2862939
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AA seq
308 aa
AA seq
DB search
MEPFKVRILGCGSALPTLQHFPSSQVVELREKLFMIDCGEGTQIQLRRLRIHFSKIIAVF
ISHLHGDHCFGLPGMLSTFGMTGRTAPLHIYAPAAFGPLLCQTLEFFCQGLGFEVIFHAV
DTTRNKVVYEDRSLTVETIPLQHRIECCGYLFREKPTLPHIRRDMIDFYHIPISQINNIK
AGADWITPDGNVVPNERLTTPAAPPRSYAYCSDTRYIKSLYKLVKGVDTLYHESTYTSED
AKRARLYWHSTSRQAAQVARDAAVGKLLLGHYSARYGNEEKLLEEAREIFPNTYLSQEGQ
IFDISAAR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggaaccattcaaagtacggattcttggctgcggcagtgccctgccgactttacagcat
tttccatcctcccaggtcgtagagcttagggagaaactgtttatgatcgactgcggagaa
gggacacaaatccagctccgccgtctgcgcatacacttctcgaaaatcattgccgtattc
atcagtcacctgcacggcgaccattgtttcggcctgccgggtatgctgtcgactttcggc
atgacggggcggacagctcctctgcatatctatgcaccggcagcctttgggccgcttctc
tgccagacactcgaattcttctgtcagggactgggatttgaagtgattttccatgctgtc
gacacgacacggaacaaggtcgtctacgaggacagaagcctgacggtagagaccattccc
ctgcagcaccgcatagaatgctgcggctacctcttccgtgagaagccgacgctgccgcat
attcgccgtgacatgattgatttctatcacatccccatcagccagatcaacaacattaag
gcgggtgccgactggattactcctgacggcaatgttgttccgaacgaacgtctgacaact
ccggccgccccaccccgcagctatgcttactgctctgacacacgatatatcaaaagcctt
tataagctggtcaaaggtgtcgatacactttatcacgaaagcacctatacgtccgaagac
gccaaacgtgcccgcctctattggcacagtacgtccagacaggctgcacaggtggcccgt
gacgcagctgtgggcaagctcctcttagggcattattctgcccgatatggaaatgaggaa
aaactgttggaagaagccagggaaatcttccccaacacctatctttcacaggaaggacag
atattcgatattagcgctgcacggtaa
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