Prevotella denticola: HMPREF9137_2475
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Entry
HMPREF9137_2475 CDS
T01459
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pdn
Prevotella denticola
Brite
KEGG Orthology (KO) [BR:
pdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdn03032
]
HMPREF9137_2475 (gyrA)
03400 DNA repair and recombination proteins [BR:
pdn03400
]
HMPREF9137_2475 (gyrA)
Enzymes [BR:
pdn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HMPREF9137_2475 (gyrA)
DNA replication proteins [BR:
pdn03032
]
Prokaryotic type
DNA Topoisomerases
HMPREF9137_2475 (gyrA)
DNA repair and recombination proteins [BR:
pdn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HMPREF9137_2475 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
GDA1_CD39
PRT_C
Retrotran_gag_2
ANAPC2
Motif
Other DBs
NCBI-ProteinID:
AEA20196
LinkDB
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Position
complement(2898062..2900644)
Genome browser
AA seq
860 aa
AA seq
DB search
MDENQTIDQDRIMKINIEEEMKSSYIDYSMSVIVARALPDVRDGFKPVHRRILFGMRGIG
NFSNQPYKKCARVVGEVLGKYHPHGDSSVYGALVRMGQDWNMRYKLVDGQGNFGSVDGDS
AAAMRYTECRLSKMGEHIMDDIEKDTVDMVNNFDDTLREPAVMPTKIPNLLVNGGNGIAV
GMATNIPTHNLGEVIDGCCAYIDNPEITTDGLMEFIPAPDFPTGAYIYGLQGVKDAYETG
RGRVVMRAKAEIESDENHDKIVVTEIPYGVNKQQLIEYIADLVKEGKLEGISNVNDETGR
QGMRIVVDVKRDANANVILNKLFKMTALQSSFSVNCIALVGGRPRLLSLRECIKYFVEHR
HDVTIRRTRFDLKKAQERAHILEALIKACDNIDEVVHLIRASKTPSEAQKNLEKRFGFDE
LQSKAIVDMRLSQLTGLRLDQLHQEFDELMQTIKDLQEILDNPERCREVMKAELQEVKEK
YGDERRTEIIPDEHEFNAEDFYPNDPVVITISHLGYIKRTPLADFKEQARGGVGSKGART
REKDFTEYIYPATMHQTMLFFTRKGRCYWMKCYDIPEGDKNAKGRAIQNMLSLEAGDAVN
AFLRIRGLDDDAFLDSHFVVFATKQGIVKKTSLRAYSRPRTNGVIAININEGDEVVDVRL
TNGKNELIMADRNGRACRFDESNIRTMGRVSTGVRGMRLDEDGQDEVVGMIVVNDPVNET
VMVVSEEGYGKRSQVEDYRLTNRGGKGVKTLNITEKTGKLVAIKNVTDANDLMIINKSGI
VIRMSVAECRVMGRATQGVRLINLAKKNDVIASVCKVMSSEMETQVEEESREQWSKTSEE
IKSDTVAPGETEDTTPAGFE
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaaatcagacaattgatcaggacagaatcatgaagatcaacatcgaggaggag
atgaaaagctcctacatcgactattctatgtcggtgattgtggcgcgtgccctccctgat
gtccgtgacggtttcaagcctgttcaccgccgcattctcttcggtatgcgcggtatcgga
aacttcagcaaccagccttacaagaagtgcgcccgcgtcgtcggcgaggtgctcggtaag
tatcatccacacggagactcttctgtctacggtgcgctcgtacgcatgggacaggactgg
aatatgcgctacaaactggttgacgggcagggtaacttcggttccgtcgacggcgactct
gccgctgcaatgcgttacacggagtgccgtctctccaaaatgggcgagcacatcatggac
gacattgagaaagacacggtggacatggtcaacaacttcgatgacacactgcgtgagccg
gccgtgatgccgacgaagattcccaatctgcttgtaaacggcggcaacggtattgccgtg
ggcatggcgacaaacatccctacacacaatctcggtgaagttatcgacggatgctgtgcc
tacatagacaatccggagattacgaccgacggtctgatggagttcattcctgctcccgac
ttccctacaggggcatacatatacggtctgcagggagtcaaggatgcctatgagacagga
cgcggacgtgtcgtaatgcgtgccaaggcagagattgaaagcgatgaaaatcacgacaaa
atcgtagttacagagattccttacggtgtaaacaaacagcagctcattgagtatattgcc
gatttggtgaaggaaggcaagctcgaaggcatatcaaacgtcaacgacgagaccgggcgg
cagggaatgcgtatcgtagttgatgtaaagcgtgacgcaaatgcgaatgtcattctgaat
aaactcttcaagatgacagccctgcaaagctcattctcagtgaattgcattgcattggta
gggggacgcccacgtctgttgagccttcgtgagtgtatcaagtacttcgtagaacaccgg
catgatgtcaccatccgccgcacaaggttcgacctcaagaaggcacaggagcgtgcgcat
attctggaagcactgataaaggcctgcgacaacatcgacgaggtggttcatcttatccgt
gccagcaagacaccttccgaagcacagaagaaccttgagaagcgtttcggttttgacgaa
ctgcagtcaaaggcaattgtcgatatgcgtctgtctcaactgacaggcctgcgtctcgac
cagctacaccaggaatttgacgagctgatgcagaccatcaaggatctgcaggaaatcctc
gacaatccggagcgttgcagggaagtgatgaaggcagaactgcaggaggtgaaggagaag
tacggcgatgaacgtcgtacggagatcattcccgacgaacacgagttcaatgcagaagat
ttctatcctaacgaccctgtcgtcattaccatcagccacctcggttatatcaagcgtacg
ccgcttgccgatttcaaggagcaggcacgtggcggcgttggctcgaagggggcacggaca
cgggaaaaggacttcaccgaatatatctatccggcgacgatgcaccagacgatgcttttc
ttcacgcgcaagggccgctgctactggatgaagtgctacgacattcccgagggcgacaag
aacgcaaagggacgtgccatccagaatatgctctcgctggaggcgggcgatgccgtaaac
gctttccttcgcatccgcgggcttgacgacgatgcgttccttgactcccacttcgtggtg
tttgccactaagcagggcattgtgaagaagacctccctccgtgcctactcacggccacgt
accaacggtgtgatagctatcaatatcaacgagggcgacgaggtagtagacgtccgcctg
acaaacggaaagaacgagctgatcatggccgaccgcaacggccgcgcttgccgcttcgac
gagtcgaacatccgcaccatgggacgtgtttcgaccggtgtgcgtggtatgcgtctggac
gaggacggtcaggatgaggtcgtcggcatgattgttgtcaatgatcctgtcaatgagacg
gtcatggtcgtgtctgaagagggctatggcaagcgctcacaagttgaggactaccgattg
accaaccgtggcggaaagggtgtcaagacgctgaacatcacggaaaagacgggtaagctc
gtcgccatcaagaacgttaccgatgctaacgacctgatgattatcaacaagagcggcatc
gtcatccgaatgtcggttgccgagtgtcgtgtcatgggacgtgcgacacagggtgtccgc
ctgatcaatctcgccaagaagaatgatgtcatagcgtctgtctgcaaggtgatgagctct
gaaatggagacacaggttgaggaagaaagccgtgagcagtggtcgaagaccagtgaagaa
atcaagagcgacactgttgctccgggagagacggaagacacaacgcctgccggcttcgaa
taa
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