Parascardovia denticolens: PSDT_0007
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Entry
PSDT_0007 CDS
T03978
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pdo
Parascardovia denticolens
Brite
KEGG Orthology (KO) [BR:
pdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdo03032
]
PSDT_0007
03400 DNA repair and recombination proteins [BR:
pdo03400
]
PSDT_0007
Enzymes [BR:
pdo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PSDT_0007
DNA replication proteins [BR:
pdo03032
]
Prokaryotic type
DNA Topoisomerases
PSDT_0007
DNA repair and recombination proteins [BR:
pdo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PSDT_0007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BAR04526
UniProt:
E6JYE9
LinkDB
All DBs
Position
7743..10511
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AA seq
922 aa
AA seq
DB search
MADENDQNDEYMAEAHDTDDALEPLSPQATAEDFGLLKGTRIKSMDLQQEMRESYLAYAL
SVIVERALPDVRDGMKPVHRRVVYAMYDGGYRPDRGYNKCSRVVGDVMGKYHPHGDAAIY
DTLVRMAQYWSMRYLLVDGQGNFGSPGDDPAAAMRYTECRMAPLAMELVRDIDKDTVDFV
PNYDGKTQEPTVLPSRFPNLLVNGSAGIAVGMATNIPPHNMREVAQGVHWALDHPEASRE
ELLNNLIAIIKGPDFPTGATILGHKGIEQAYRTGRGLITMRAVVNTEEINGRLCLVVTEL
PYQVNPDRLASSIREAVRDGKIQGIADMRDETSGRTGQRLVLVLKRDAVPKVILNNLYKH
TQLQQTFGANMLALVDGVPRTLSLDAFIRHWISHQLEVVDRRTKYLKREAEERDHILQGY
LKALDMIEEVIALIRRSPDVDQARTGLMDLLDVDQVQADAILAMQLRRLAALERQKIIDE
HEELMRKIADYNDILAKPERQRAIVGDEMDEIVDKYGDDRRTRILPFSGEMNVEDLIAEE
NVVVTVTHSGYIKRTKADEYRAQHRGGKGIKGTRLREDDVVDHFFLTSTHNWLLFFTNEG
RVYRIKGYEVPEGSRDSKGQHVANLLQLGPDEKIQQVLSIHDYDEAKYLVLATRSGKIKK
TRLNEYDSTRQGGLIAVRLREIEGAFRTDEEGNQVPVIDELIGAALCNDEDEIIVVSQQG
MSVKFSADDETLRSMGRQTAGVQAMKFRGQAGEDLLLSMDVVPAESDSDLVVVTNEGFAK
RTALSEYRLQGRNGYGVKAINLVEGRGSLVGAIVVHEDDQIMAIMKSGKVIRSDVAEIKR
TGRNTQGVTLAKPDKGDEIISIARNAEKDDEDAEEDQATEAVDAADAATGAPADTGTDNG
TDDATVETKATEPVATSKADEE
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
gtggcagacgaaaacgatcagaacgatgagtacatggccgaagcccatgacaccgatgac
gccttggagcctttgagcccccaggctacggccgaagatttcggcctgctcaaggggacc
aggatcaaatccatggacctgcagcaggagatgcgcgaatcctacttggcttacgccctt
tcggtcatcgtggaaagagccctgccggacgtgcgcgacggcatgaagccggtccaccgc
cgtgtggtctacgccatgtacgacggcggctaccggccggacaggggctacaacaagtgc
tcccgcgtggtcggggacgtgatgggtaagtaccacccccatggcgacgcggccatttac
gacactttggtccgtatggcccaatactggtccatgcgttacctcctggtggacgggcag
ggcaacttcggttcccctggcgacgaccccgccgccgccatgcgttacaccgagtgccgt
atggctcctttggccatggaattagtgcgcgatatcgacaaagacaccgtcgacttcgtc
cccaattatgacggcaagacccaggaaccgaccgtcttgcccagccgtttccccaatctg
ctggtcaacggttccgcaggcatcgccgtcggcatggccaccaacatccctccccacaac
atgagggaagtagcccaaggcgtgcactgggccctggaccatccggaggcctcccgagag
gaattgctcaacaacctgatcgccatcatcaaggggccggacttccctacgggagccacc
atcctggggcataaggggatcgaacaggcctaccgaaccggtcgcggactcatcaccatg
agggccgtggtcaataccgaagaaatcaatggccgcctctgcctggtcgtcaccgaactg
ccttaccaggtgaacccggaccgtctggcctcttccatccgtgaagccgtgcgcgatggc
aagatccaaggcatcgccgacatgcgtgacgagacttccggccgtaccggccagcgtctg
gtcctggtgcttaagcgcgacgccgtgcccaaggtgattctcaataacctctacaagcac
acccagctgcagcagaccttcggcgccaatatgctggccctggtcgacggagttccccgc
acgctcagcctggacgccttcatccgccactggatcagccaccagctggaagtggtcgac
cgccggaccaagtatctgaagcgggaagccgaagagcgcgaccacatcctgcagggctac
ctcaaggctttggacatgatcgaagaggtcatcgccctcatccgccggtcccccgacgtg
gatcaggcccgcaccggcctcatggacctgctggatgtggaccaggtccaggctgacgcc
attttggccatgcagctgcgccgtctggccgccttggaaaggcagaagatcatcgacgag
catgaagaactcatgcgcaagatcgccgattacaacgacatcctggccaagccggaaagg
cagagggccatcgtcggcgacgagatggacgagatcgtcgataaatacggcgacgaccgc
cgcacccgcatcctgcctttctccggcgagatgaacgtggaagacctgatcgccgaagag
aacgtggtggtcaccgtcacccattccggttacatcaagcggaccaaggccgatgaatac
cgggcccagcatcggggcggcaaaggaatcaaggggactcgcctgcgcgaagatgacgtg
gtcgaccacttcttcctcacttccacccacaactggctgcttttcttcaccaacgaaggc
cgggtctaccggatcaagggttacgaggtccctgaagggtcccgtgattccaaaggccag
catgtggccaacctcctccagcttggcccggatgagaagattcagcaggtcctgtccatc
catgactatgatgaagccaagtacctggtcttggccacccgtagcggaaagatcaagaag
acccggctgaacgaatacgattccacccgtcagggcggcttgatcgccgttcgcttgcgc
gagatcgaaggggccttccgaacggatgaggagggcaatcaggtgccggtgatcgatgag
ctcatcggggccgccctctgcaacgatgaggacgagatcatcgtcgtctcccagcagggg
atgagcgtcaagttctccgccgatgatgagaccttgcggtccatgggtcgccagacggcc
ggcgtccaggccatgaagttccgcggacaggcgggggaggacctcctgctgagcatggac
gtggtcccggccgagtccgattccgacctggtcgtggtgaccaacgaaggcttcgccaag
cgtacggccctgtccgaataccggctccaaggccgcaacggctatggggtcaaggctatc
aacctggtggaaggccgggggtccttggtcggggccatcgtggtccacgaagacgaccag
atcatggccatcatgaagtctggcaaggtgatccggtccgatgtggccgagatcaagcgg
accggccgcaatacccaaggtgtcactttggccaagccggacaagggggacgagatcatc
tccatcgcccgcaacgccgaaaaggacgatgaggatgcggaggaggaccaggcgaccgag
gccgtcgatgccgcggacgccgccactggcgcccccgccgatactggcacggataatggt
accgatgatgctacagtggagacaaaggctaccgaaccggtcgccaccagcaaggctgac
gaggagtaa
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