Parascardovia denticolens: PSDT_0111
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Entry
PSDT_0111 CDS
T03978
Name
(GenBank) DNA polymerase III gamma and tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pdo
Parascardovia denticolens
Pathway
pdo03030
DNA replication
pdo03430
Mismatch repair
pdo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSDT_0111
03430 Mismatch repair
PSDT_0111
03440 Homologous recombination
PSDT_0111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdo03032
]
PSDT_0111
03400 DNA repair and recombination proteins [BR:
pdo03400
]
PSDT_0111
Enzymes [BR:
pdo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSDT_0111
DNA replication proteins [BR:
pdo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSDT_0111
DNA repair and recombination proteins [BR:
pdo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSDT_0111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
DNAX_ATPase_lid
RuvB_N
AAA_22
zf-CXXC
AAA_14
AAA_19
DEAD
Rad17
AAA_2
Motif
Other DBs
NCBI-ProteinID:
BAR04630
UniProt:
E6K2A2
LinkDB
All DBs
Position
145414..148116
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AA seq
900 aa
AA seq
DB search
MALALYRRYRPDTFDGVVGQEQVTIPLKRALDEGKLTHAYLFSGPRGCGKTSSARILARC
VNCVKGPTSHPCGECDSCRDLATNGPGSIDVIEVDAASHNGVEDARELRDRAGFAPARDR
YKIFILDEAHMVTQQGFNALLKIVEEPPEHVMFIFATTEPDKVIGTIRSRTHHYPFRLVP
PEVMGPYLEGICKQEKIQPQPGVLKLAMRTGGGSVRDTLSVLDQLMVGSVDGTISYDSAV
TLLGYTPDALISEAVDAVIDHDGEKLYRVIEKIVIGGYDPRKFVEDLLSHVRDLLVLTLA
GKSAEKTLSDQAASEDLGSLTRQAQALGLQHITAMAEIINRALASMSGTTSPRMRLELLA
AELLVPNEYGEANAAGPALGAASSSSAAASTALGQNSAATGGSGNGLGAGSRTGQRIGQG
RSRGGYQRPSQYSPQGRLAQQRTEQDATRKYGEATEQETKRMQAPIQAQAQESAPVQEQK
QEQAPAQVQTRTQTQTTEQRPESPQPAKPQIATPQPDQPEAPAVNPQHTQAASQDHAQAL
SHPEEAWARLVSSLPSDIQQYVNTDRIPQIKLVSRGDKHRVMLTFANPLSQHAYAIAGAK
QEIDGCSSVKDIIAHKCQEVFGAGVLAAPARLTASGERVIPMSKMSPQDQQKIKAQIAAL
AVAGAKNLAGKVAEPNPASQTSRSGRETAVSSKDKAPAAEDKDDDPHREPVIPDLDEEDP
WSKPLTHPQSDPVRQGGTSSSGGSSRKSRSRPGPAKSSGFPPASSLANSAESSESSKSPE
PSMPLGSSGLSDSSDSLGPRGMQGPDAGSSSSSSVTPSAPTALSQAAPSRAAPSRAASSQ
ASPSPAASSSEVQPEGPDSPADFSADDAHVNDQGRMTVEEVAAFFDARRVEESAPSSDEG
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggcacttgcactctatagacgttatcgtcctgacaccttcgacggggtcgtcggacag
gaacaggtcaccatccccctgaagagggctctggatgagggcaagctgacccatgcctat
cttttctccggtccgcgggggtgcggaaagaccagctccgcccgcatcctcgcccgttgc
gtgaactgcgtcaaaggcccgaccagccatccttgcggcgaatgcgacagctgtcgcgat
ttggccaccaacggccccggttccattgatgtgatcgaagtggacgccgccagccataac
ggcgtggaagacgcccgcgaactgagggatcgagccggcttcgcccccgcccgggacagg
tacaagatcttcatccttgacgaggcccatatggtcacccaacaggggttcaacgccttg
ctgaaaatcgtggaggagccgcctgagcacgtcatgttcattttcgccaccaccgaaccg
gataaggtgatcgggaccatccgttcccggacccaccattatcctttccgcttggttcct
ccggaagtgatgggcccctacttggaaggcatctgcaagcaggagaaaatccagccccag
ccgggcgtcctcaagctggccatgcggaccggaggcgggtccgtccgcgataccctgtcc
gtcctcgatcagctgatggtcggctccgtcgatgggacgatcagttatgactccgccgtc
accctccttggctacactcccgacgccttgattagcgaagcggtggatgcggtcatcgac
catgatggggagaaactctatagggtgatcgaaaagatcgtcatcggcggttacgacccg
cgaaaattcgtggaagacctgctctcccacgtccgcgacctgttggtcctcaccttggct
ggcaagagcgctgaaaagacgttgagcgaccaagccgcgtccgaggacctcggcagcctg
acccggcaggcccaagcgctgggactgcagcatatcacggcgatggccgaaatcatcaac
cgagccttggcttcgatgtcgggaacgacgtcgcctcgcatgcgtttggaactgttggca
gcggagcttctcgttcccaatgaatatggggaggcgaacgccgctggtcccgctcttggg
gccgcttcctcttcctctgcggccgcttctacggctctggggcagaactcggcagctacc
ggtggctcaggcaatggtctgggggcagggtcaagaaccggtcaaagaatcggtcaaggc
cggagtcgcggcggttatcagaggccaagccaatattctccccaagggcggctggctcag
caaaggacggaacaggacgcaacccggaaatatggggaggcgaccgaacaggagaccaag
cggatgcaggcgcccatacaggcacaagcgcaagaatctgcgccggtgcaggaacagaag
caggagcaggcacccgcgcaagtgcaaacgcggacgcaaacgcagacaactgagcaaagg
ccagaatcgccgcagccggcaaagccgcagatcgcaacaccgcaaccagaccaaccggag
gctccggcagtcaacccacagcatacgcaggcggcgagccaggaccatgcccaggctttg
tcccaccccgaagaggcgtgggcgcgtctcgtctcctccttgcccagcgacatccaacag
tatgtgaacacggaccgcatcccgcaaatcaagttggtcagtcgcggagacaagcaccgg
gtcatgctcacgttcgccaatccactcagccaacatgcttatgccatagccggcgccaaa
caggaaatcgatggctgttcatccgttaaagacatcatcgcccataaatgccaagaggtc
tttggagccggggttcttgccgcgccggcccgtctcacggcttcgggcgagcgagtgatc
cccatgagcaagatgtccccgcaagaccagcagaagatcaaggcccagatcgccgccctc
gcggtcgcgggagcgaagaacctggccggaaaagtagccgaacccaatcctgcctctcaa
acgagccggtcaggccgtgagaccgccgtctccagcaaggacaaggcgcccgccgctgaa
gacaaggatgacgacccccatcgagagccggtcatccctgatctcgatgaggaggatccc
tggtccaagcctctgactcatccgcagtcggatcctgtccgtcaaggcggtacttcttcc
tcggggggttcgtcaaggaaatcgagaagccggcctggcccggcaaaatcttccggcttc
cctcccgcttcttccttagcgaattcggctgagtcatcagaatcatcgaagtcgccagag
ccgtcaatgccactagggtcatcagggctatcggattcatcggattcgctgggaccacgg
gggatgcaggggccggatgcgggttcgtcttcctcgtcttctgtcacaccttcggcccca
acggctctatcgcaagcggctccatcacgggcggctccatcacgggcggcttcctctcaa
gcatcgccgtctccggccgcttcatcctcggaggtgcagccagagggcccggattcgcct
gcggatttttcggctgatgacgcgcatgtcaacgaccaaggccggatgacggtcgaagag
gtcgccgccttcttcgacgcgcgccgggtggaagagtcggccccttcgtccgatgaagga
tga
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