Parascardovia denticolens: PSDT_0404
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Entry
PSDT_0404 CDS
T03978
Name
(GenBank) ribose ABC transporter substrate binding component
KO
K10439
ribose transport system substrate-binding protein
Organism
pdo
Parascardovia denticolens
Pathway
pdo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pdo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSDT_0404
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
PSDT_0404
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdo02000
]
PSDT_0404
Transporters [BR:
pdo02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
PSDT_0404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Peripla_BP_6
PA
ZNRF_3_ecto
Motif
Other DBs
NCBI-ProteinID:
BAR04923
UniProt:
E6K2M4
LinkDB
All DBs
Position
484556..485497
Genome browser
AA seq
313 aa
AA seq
DB search
MNSTFSKITRTALALVCSATLMAGMGACGVGGSAAGGDKVSILISTLNNPFFVDLRDGAQ
QEAKKLGINLQVSDAQNDSTTQQNQAQNAQSQGAKAVIINPVDSDAAAPAVASLLGAKVP
VVSVDRSVTGEDVNAHIASDNVAGGAQAARELAKGLGGKGKVIILQGTPGAASTRDRGKG
FKDEIKKYPGIKVVAEQTANFDRAEALNVTSNLMQSNPDAVGLYAENDEMALGAVQALGS
KAGKDVKVFGFDGTDDGLKAVKKGTMLGTIAQQPKVLGKKAVDAAYKLIKGQSVEKKQAI
AVKTVTKENAAEF
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgacattctcaaagatcacccggaccgctttggccttggtctgctcggccacc
ctgatggcaggcatgggagcctgcggggtcggcggttccgcggcgggtggggacaaggtc
tccatcctcatctccaccctcaataaccccttcttcgtcgacctgcgcgacggcgctcag
caggaggcgaagaagctgggcatcaacctgcaggtctccgacgcgcagaacgactccacc
acccagcagaaccaggcccagaacgcccaatcccaaggggctaaggcagtcatcatcaac
ccggtggattccgacgccgccgcgcccgccgtggcgagcctgttgggggccaaggtccca
gtggtgagcgtggaccgttccgtgaccggggaggacgtgaacgcccacatcgcctccgat
aacgtcgccggcggcgcccaggcggcccgggaactggccaaaggcctaggcggcaagggc
aaggtcatcatcctccaggggactcccggcgccgcttccacccgtgaccgcggcaagggc
ttcaaggacgagatcaagaagtatcccgggatcaaggtcgtggccgaacagaccgcgaac
ttcgaccgggccgaagccttgaacgtcacgtccaacctcatgcagtccaaccctgacgcg
gtcggcctctacgcggagaacgacgagatggccctgggagccgtccaggccttgggttcc
aaggctgggaaggacgtgaaggtcttcggcttcgatgggaccgacgatggtctcaaggcc
gtcaagaaagggaccatgctggggaccatcgcccaacagccgaaggtcttgggcaagaag
gccgtcgacgccgcctacaagctcatcaagggccagtcggtcgagaaaaagcaggccatc
gccgtcaagaccgtgaccaaggagaacgcggccgagttttag
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