Parascardovia denticolens: PSDT_0464
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Entry
PSDT_0464 CDS
T03978
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pdo
Parascardovia denticolens
Pathway
pdo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSDT_0464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdo03019
]
PSDT_0464
03110 Chaperones and folding catalysts [BR:
pdo03110
]
PSDT_0464
03029 Mitochondrial biogenesis [BR:
pdo03029
]
PSDT_0464
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdo04147
]
PSDT_0464
Enzymes [BR:
pdo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PSDT_0464
Messenger RNA biogenesis [BR:
pdo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PSDT_0464
Chaperones and folding catalysts [BR:
pdo03110
]
Heat shock proteins
HSP60 / Chaperonin
PSDT_0464
Mitochondrial biogenesis [BR:
pdo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PSDT_0464
Exosome [BR:
pdo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PSDT_0464
Exosomal proteins of other body fluids (saliva and urine)
PSDT_0464
Exosomal proteins of breast cancer cells
PSDT_0464
Exosomal proteins of colorectal cancer cells
PSDT_0464
Exosomal proteins of bladder cancer cells
PSDT_0464
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5021
ISG65-75
Motif
Other DBs
NCBI-ProteinID:
BAR04983
LinkDB
All DBs
Position
559213..560826
Genome browser
AA seq
537 aa
AA seq
DB search
MAKIIKYDEEARQGMLEGLDELANTVKVTLGPKGRNVVLDKSYGAPTITNDGVSIAKEID
LEDPYQRIGAELVKEVAKKTDDVAGDGTTTATVLAQALVHEGLKNVTSGSNPIALRRGIE
KASQTIVKNLLENAKPVETKDQIAATATISAGDPEVGEKIAEALDKVGQDGVVTVEDNNK
FGLDLDFTEGMRFDKGYISPYFVTNADDQTAVLEDPYILLTSGKVSSQQDIVHIADLVIK
SGKPLLIVAEDVDGEALPTLVLNKIRGTFNTVAVKAPGFGDRRKAMLQDMAILTGAQVVS
DELGLKLDSIDDTVLGHAAKVIVSKDETTIVSGAGSKEDIAARVAQIRSEIEASDSDYDR
EKLQERLAKLAGGVAVIKVGAATEVEAKERKHRIEDAVRNAKAAIEEGLLPGGGVALVQA
AGEAEKSVKLDGDEATGADIVFRAIEAPLKQIAENAGLSGEVVIDKVRTLPAGSGLNAAT
GEYEDLMKAGVTDPVKVTRSALQNAASIAGLFLTTEAVVANKPEPPAPAAAQPDMGY
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagattatcaagtatgacgaggaagcccgccaaggcatgttggaaggcttggat
gagctcgccaacaccgtgaaagtgacgctgggacccaaggggcgtaatgtcgttctggac
aagtcctatggcgctcccaccatcaccaacgatggcgtttccatcgccaaggagatcgat
ctggaggatccctaccagcgtatcggcgccgagctggtgaaggaggtcgccaagaagacc
gatgacgttgccggcgacggcaccaccaccgcaaccgttctggcccaggctctggttcat
gaaggtttgaagaacgtgacctctggctcgaaccccatcgctttgcgtcgcggaattgaa
aaggcctcccagaccatcgtcaagaatctgctggagaacgccaagcctgtcgagaccaaa
gaccagattgcggctactgcgaccatctcggccggagatcccgaagtcggcgaaaaaatc
gccgaggccttggacaaggttggccaggatggcgttgtcaccgttgaggacaacaataaa
ttcggcctggatctcgatttcacggaaggcatgcgcttcgacaaggggtatatttccccc
tatttcgtcaccaacgccgacgatcagaccgcggttttggaggatccttacatcttgctg
acctccggcaaggtttccagtcagcaggacatcgttcacatcgccgacttggtcatcaaa
tccggcaagcccttgctgatcgtcgctgaggatgtcgacggggaggccctgcctaccttg
gtcctcaacaagatccgtggaactttcaacacggtcgctgtgaaggcccccggcttcggc
gatcgtcgtaaggctatgctgcaggatatggcgatcctcaccggtgcccaagtagtgtcc
gatgagctcggtctcaagctggattcgattgatgacaccgtgctcggtcatgctgcgaag
gttatcgtctccaaggacgagaccaccattgtatcgggcgctggttcgaaggaagatatc
gccgctcgcgtcgcccagattcgttccgagatcgaagcttctgattccgattacgatcgc
gagaagctccaggagcgtttggccaagctcgccggtggtgtcgccgtcatcaaggttggc
gctgctaccgaagtcgaagccaaggaacgcaagcatcgtatcgaggatgcagtccgtaac
gcaaaagccgccattgaggaaggattgcttcctggtggtggtgtcgccttggtgcaggca
gccggcgaggctgaaaagagcgtcaagctggatggcgatgaggctacgggagccgatatc
gtcttccgcgccatcgaagccccgctcaagcaaatcgctgaaaacgcaggcttgtctggc
gaagtggtgattgacaaagttcggacccttcctgctggttctggtctgaatgccgctacc
ggtgagtacgaagacctgatgaaggccggcgtgaccgaccctgtgaaggtgactcgttcc
gctctgcagaatgccgcttccatcgccgggcttttcctgaccactgaagctgtggtggcg
aacaagccagagcctccggcccctgccgcggctcagcctgatatggggtactaa
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