Parascardovia denticolens: PSDT_0472
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Entry
PSDT_0472 CDS
T03978
Name
(GenBank) Clp protease
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
pdo
Parascardovia denticolens
Brite
KEGG Orthology (KO) [BR:
pdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pdo03110
]
PSDT_0472
Chaperones and folding catalysts [BR:
pdo03110
]
Heat shock proteins
HSP100
PSDT_0472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
TniB
nSTAND3
AAA_14
UVR
AAA_18
VapE-like_dom
ATPase_2
AAA_28
bpMoxR
IstB_IS21
AAA_3
TsaE
AAA_24
ResIII
Zeta_toxin
AAA_19
DNA_pol3_delta2
T2SSE
DUF7231
Torsin
Motif
Other DBs
NCBI-ProteinID:
BAR04991
UniProt:
E6K0B6
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All DBs
Position
568839..571427
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AA seq
862 aa
AA seq
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MFERFTDRARRVIVLAQEEARALKHNYIGTEHLLLGLIREGEGVAAKSLASKGVELDAAR
QQVEEMIGKGSAAPTGHIPFTPHARQVLELSLREALQLGHSYIGTEHILLGLIHEGEGVG
TQVLVKMGVDIANLRTTVIDSIRDTSAGSSTGQMANSGGVADKTNRSGSSLLDQFGRNLA
QEAKDGKLDPVIGRSNEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAEKIVADDVP
ETLKDKQIYALDLGSMIAGSRYRGDFEERLKKVLKEIQVRGDVVLFIDEIHTIVGAGSAD
GAMGASDMLKPMLARGELQTIGATTTEEYRKYIEKDAALERRFQPIQVAEPTIAETIEIL
KGLRKKYEDHHHVTITDEAIQAAAELSSRYIQDRHLPDKAIDLIDEAGARLRIKRLTAPS
ALKELDMKVAKVKADKDQAIADQDFEKAASLRDAQEKLEQERKDKEKSWREGESDVSMVV
TEDTIAHVISSSTGIPVFKLTETESKKLLGMEDALHKRVIGQDEAVSALARSIRRARVGL
KDPKRPSGSFIFAGPTGVGKTELAKALAEYLFDDEDALIRVDMSEFGEKYSTSRLFGAPP
GYVGYEEGGELTEKVRRKPFSVILFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKN
TIIIMTTNLGTSKISQAQNTGFNLGGQTETSYQRMKDQVQSELKGQFRPEFLNRLDDIIV
FKQLTEPQVRQIVDLDVKALNDRLFERHMTVELTDKAKDLLAEKGFDPLLGARPLRRVIQ
RDIEDAISEKILLGDLKENQEIVVDAEGEGILGEFTFTSKPYDQALAAQDHDGQGQGDAE
QAQREPDQTVDEVDEGAMPAVN
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaacgttttaccgatagggcccgccgggtcatcgtgcttgctcaggaagaggcg
cgagccttgaagcacaattatattggcactgagcacctcctgctcggcctcatccgtgag
ggtgaaggcgtggccgccaagtccctggcctccaaaggcgtggagcttgacgccgcccgc
caacaggtggaagagatgatcggcaagggctccgcggcccctacaggccacattcccttc
acccctcatgccagacaggtcttggagctgtccttgcgggaggccctgcaactggggcat
tcctatattggcacggaacatatccttttgggtctcatccacgaaggcgaaggggtaggg
acccaggtcctagtcaagatgggggtggacatcgccaatctgcgcaccaccgtcatcgat
tccattcgcgataccagcgccggctcttctaccggtcagatggcaaattccggcggtgtg
gccgataagaccaaccggtccggatcctctcttctggaccagttcggccgtaacctggcc
caggaagcgaaagatggcaaactcgatccggtcatcgggcggagcaatgaaatcgaacgc
gtcatggtcgtgttgtcccgccgcactaagaacaatcctgtgctgatcggcgaacctggc
gtaggtaagaccgccgtggtagaaggcttggccgagaaaatcgtggcggatgacgttccg
gagaccttgaaagacaagcagatctacgctttggacctgggctccatgatcgccggctcc
cggtaccggggggatttcgaagaacgcctgaagaaggtgctcaaagagatccaggtccgt
ggtgacgtggtcctcttcatcgacgagatccataccatcgttggcgccggttccgcggat
ggggccatgggcgcttcggacatgctcaagcccatgctggctcgcggcgagctgcagacc
atcggcgccaccacgaccgaagagtatcgcaagtacatcgagaaggacgccgctttggag
cgccgtttccagcccatccaggttgcggaaccaaccatcgcggagaccatcgagattctg
aaaggcctgcgcaagaagtacgaagaccatcatcatgtgaccatcaccgacgaagccatc
caggccgccgctgagctgtcttcccggtatatccaggacaggcatctgcccgacaaggcc
atcgacttgatcgatgaggctggcgcccgcctgcgcatcaagaggctgacggcccccagc
gccttgaaggagctggatatgaaggtggccaaggtcaaggccgacaaggatcaggccatc
gccgaccaggacttcgagaaggccgcgtctttgcgcgacgcccaggagaagctggagcag
gaacgcaaggataaggagaagtcttggcgcgaaggggagtccgacgtttccatggtggtg
accgaagacaccatcgcccatgtgatttcctcctccaccggcatcccggtcttcaagctg
accgagaccgaatccaagaagcttttgggcatggaggacgccttgcacaagcgggtcatc
ggccaggatgaagccgtttcagccttggcccggtccatccgccgcgcccgcgtggggctg
aaggatcccaagcgtccttccggttccttcatcttcgccggacctaccggcgtgggtaag
acggagctggccaaggccttggccgagtatctctttgatgatgaggacgccctcatccgc
gtggacatgtccgaattcggcgagaagtattccacctcccgcctcttcggcgcccctccc
ggatacgtgggttatgaggaaggcggcgagctgaccgagaaggtccgccgcaagcccttc
tccgtcatccttttcgacgaaatcgagaaggcccaccccgacatcttcaacaccctcctg
caggtcttggacgatggtcatttgaccgacggtcaaggtcgcaaggtggacttcaagaac
acgatcatcatcatgaccaccaacctgggcaccagcaagatctcccaggcccagaacacc
ggtttcaacctgggtgggcagacggagacctcctaccagcgcatgaaagaccaggtccag
tcagagttgaaggggcagttccgtccggaattcctcaaccgcctggatgacatcatcgtc
ttcaagcagctgacagagccgcaggtccgccaaatcgtagacttggatgtgaaggctttg
aatgaccggctcttcgaacgccatatgaccgtggaattgaccgacaaggccaaagacctc
ctggccgagaagggcttcgatccgcttctgggcgcccgtcctttgcggcgcgtcatccag
cgggatatcgaagacgccatctccgagaagattcttttgggcgacctcaaggagaatcag
gagatcgtggtcgacgccgaaggcgaaggcatccttggggaattcactttcaccagcaag
ccttacgaccaggccctcgccgcccaagaccatgacgggcagggccagggcgatgccgaa
caggctcagcgagaacccgaccagaccgtggacgaggtggatgagggagccatgccggcg
gtcaactaa
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