Parascardovia denticolens: PSDT_0501
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Entry
PSDT_0501 CDS
T03978
Name
(GenBank) GTP-binding protein
KO
K03665
GTPase
Organism
pdo
Parascardovia denticolens
Brite
KEGG Orthology (KO) [BR:
pdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdo03009
]
PSDT_0501
Ribosome biogenesis [BR:
pdo03009
]
Prokaryotic type
GTPases
PSDT_0501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP-bdg_N
GTP-bdg_M
MMR_HSR1
FeoB_N
MMR_HSR1_Xtn
RsgA_GTPase
Dynamin_N
AAA_16
cobW
GTP_EFTU
SRPRB
DUF885
Arf
Methyltrans_SAM
AAA_22
N1221
Motif
Other DBs
NCBI-ProteinID:
BAR05020
UniProt:
E6K041
LinkDB
All DBs
Position
607791..609638
Genome browser
AA seq
615 aa
AA seq
DB search
MAGKTGKQAYKSKASYKSVRKAGGRHRADRILDEDKTKASDNDQASQINGQALRGNDRTF
VDQVSQGKGTESEGSLGGGILSGSSEVLISDDRQAGASARSDFARKVNGEIGDDGEAWEE
RESRNQLRHITGLGELQDVTEVEYRQVRLEKVVLVGVWSSKETTFAQAEESLRELAALAQ
TAGAQVMDGVLQHRFKPDSATYVGKGKANEIASIVAATEADTIVVDADLPPSQRRALEDV
TKVKVVDRTAVILDIFAQHATSREGKAQVELAQLEYMLPRLRGWGAALSRQAGGQAAGVN
GGIGSRGPGETQIELDRRIIRTRMARLRKQIAQMAPSREIKRGSRRRNALPTVAVVGYTN
AGKSSLINRLTGSHELVENALFATLDTAVRQSETAENRRFMYVDTVGFVRRLPTQLIEAF
KSTLEEAADASLIIHVVDASHPDPFAQIDAVNAVLSDVPGVAGIPSLMVFNKIDRIDAAT
LERLRNLAPEAHFVSAATGQGLEELKAAVEAGLPKPDVHVDALVPYTAGSLISQVREFGH
IDQIDYEEEGIHLVADVDDRLAVHLIAASEDLASERGSDRAVDQPVHQPAGQLDSASTSP
RPRPVADQNRQIQPL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaagacgggaaagcaggcttataagtcaaaagcgagctataaaagcgtgagg
aaggccggcgggcgtcatcgggccgaccggatcctggatgaagacaagaccaaggccagt
gataatgatcaggcgtctcagatcaacggccaagcgttgaggggcaatgatcggacattc
gtcgatcaggtatctcaaggaaaaggaaccgaatccgagggatcgctcggaggcgggatt
ctgtcaggctcttccgaagtcctgatttccgatgatcgacaggccggggcctcggcccga
tccgacttcgcccgtaaggtcaacggggagatcggcgacgatggcgaggcctgggaagag
cgcgaaagccgcaatcagctgaggcatatcaccggcttgggcgaactccaggacgtgacc
gaagtcgaataccggcaggtccgtttggagaaagtcgtcctggtgggagtctggtccagc
aaggagaccactttcgcccaggcggaagagtctttgcgcgagctggccgccttggcccag
accgcgggggcgcaggtgatggacggggttctccagcatcgcttcaaaccggactcggcc
acttacgtcggcaagggcaaggccaacgaaatcgcctccatcgtggccgccaccgaagcg
gacaccatcgtggtcgacgctgacctgcccccttcccaacgccgcgccttggaggatgtg
accaaggtgaaggtggtggaccgcaccgccgtcatcctggacatcttcgcccagcatgcc
acttcccgcgaaggcaaggcccaggtggagctggcccagctggaatacatgctgccccgt
ctgcgtggttggggcgccgccctctcccggcaggccggcggtcaggcggccggggtcaac
ggaggcatcggctcccgtggcccgggcgaaacccagattgagctggaccgacgaatcatc
cgcacccgcatggcccggctgcgcaagcaaatcgcccagatggccccctcgcgtgaaatc
aaacgaggttcccgccgccgtaacgccctgcccaccgtggccgtggtcggctacaccaac
gcgggcaaatcctccctgatcaaccgcctgaccggttcccatgagctggtggagaacgcc
ctcttcgccaccttggacacggccgtccgccagagtgaaacggcggagaaccgtcgcttc
atgtatgtggacacggtcggcttcgtccgccgtctgcccacccaactgatcgaggccttc
aaatccaccttggaggaggcggccgacgcttccctcatcatccatgtggttgacgcctct
caccccgaccccttcgcccagatcgacgcggtcaacgctgtcctgtccgatgtgcctggg
gtggccggcatccccagcctgatggtcttcaataagatcgaccgcatcgatgccgccacc
ttggagcgcctgcggaatctggccccggaggcccatttcgtttccgccgccaccggccag
gggctggaggagctcaaggctgccgtggaagcggggctgcccaagcccgacgtgcatgtg
gacgccctcgtgccttacacggccggctccctcatctcccaagttcgtgagtttgggcac
atcgaccaaatcgactatgaggaggaaggcatccacctggtggcggatgtggatgaccgc
ctggccgtccacctgatcgccgccagcgaggatttggcctctgaacggggatctgatcgg
gccgtcgaccagcctgttcaccagcctgccggccagcttgattccgcttcgacatcccct
cggccccgccctgtcgcggaccaaaatcgtcaaatccagccgttataa
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