Parascardovia denticolens: PSDT_0562
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Entry
PSDT_0562 CDS
T03978
Name
(GenBank) DNA polymerase III delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pdo
Parascardovia denticolens
Pathway
pdo03030
DNA replication
pdo03430
Mismatch repair
pdo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSDT_0562
03430 Mismatch repair
PSDT_0562
03440 Homologous recombination
PSDT_0562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdo03032
]
PSDT_0562
03400 DNA repair and recombination proteins [BR:
pdo03400
]
PSDT_0562
Enzymes [BR:
pdo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSDT_0562
DNA replication proteins [BR:
pdo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSDT_0562
DNA repair and recombination proteins [BR:
pdo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSDT_0562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
BAR05081
LinkDB
All DBs
Position
673913..675106
Genome browser
AA seq
397 aa
AA seq
DB search
MTAGKTGIRAKTTVCVVSGADEFLTQQRIHELTAQAHGLIPEADLMELDAGSAQPYEFDE
AVSPSLLSTASLVLIAHAENMSQALADSVEAYIKQSKEAAGQEPESLVIIEHNGSPKGTG
IIRQLERAGAQVDKIESLKTPKARANFIVSLFEKRNRRIAPPAAQFIADVLGDKTGEMAS
LCDQLCDDFPDNPMPVSIVRTYLSANPQVTGFAVAQAALQGRLAQAVVDMRSAVQQRQDP
LALVGAIAMKIRSMAKASAVDQGKLTQAEAKMSPWQLRAARQEVRGWTSGGLSRCIQMAA
WVDEQCKSSGSDPLYALEKLLAALAAKGEVPLPVGEDFGDLEDFGGKLTGVGGYGIGKYG
NGGNGKQDAKLDTIQRLPAEGCRLSFRGVGFNQCSLT
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgacagctggtaagacagggataagagcgaagacgaccgtgtgcgtcgtcagcggggcg
gatgaattcctgacccaacagcggattcatgagctgacggctcaggcacatggcctgatt
cctgaggccgatttgatggaattggacgccggttccgcccaaccttacgaattcgatgag
gccgtcagcccatcccttctctcgacagcctctctcgtcctgatcgcccatgccgagaac
atgtcccaggctttggccgacagcgtggaagcctatatcaaacaaagcaaggaagcggcg
ggccaggaaccggaaagcctggtcatcatcgaacacaatggatcgcccaaagggaccggg
atcatccgtcaactcgagcgggccggcgcccaagtggacaaaatcgaaagtctgaagacg
ccgaaagctcgggcgaacttcatcgtctcccttttcgaaaagagaaatcggagaatcgcc
ccgcccgccgcccaattcatcgccgacgtcctaggagataagacaggcgagatggcctcc
ctttgcgatcagctgtgcgacgacttccctgacaatcccatgccggtatccatcgtgcga
acctatctctcggccaacccccaggtcaccggtttcgcggtcgctcaggccgccttgcaa
ggtcggctcgcccaagcggtcgtggatatgcgttccgccgtgcaacagaggcaggaccct
ctggctttggtgggggccatcgccatgaagatccgttccatggcgaaggcttcggccgtc
gatcaggggaagctgacgcaggcggaggcgaagatgtctccctggcagttaagggcggcc
agacaggaagttagaggctggacctcgggcggcttatcccgttgcatccagatggcagca
tgggtggatgagcaatgcaaatcatccggttccgaccctctctacgctttggagaaactt
ctggcagccctggcggcgaaaggggaggtccctttgccggttggggaggatttcggggat
cttgaggatttcggcggcaagctgaccggtgtcggcgggtatggaatcggcaagtatgga
aatggtggaaacggaaaacaagacgcaaaattggatacaattcaacgactgcccgctgag
gggtgtcgcttgagcttcaggggtgtcggttttaatcaatgcagtctgacttga
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