Parascardovia denticolens: PSDT_0644
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Entry
PSDT_0644 CDS
T03978
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
pdo
Parascardovia denticolens
Brite
KEGG Orthology (KO) [BR:
pdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdo03036
]
PSDT_0644
Chromosome and associated proteins [BR:
pdo03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
PSDT_0644
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
SMC_hinge
AAA_15
AAA_29
DUF3450
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BAR05163
UniProt:
E6JZA5
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All DBs
Position
778527..782204
Genome browser
AA seq
1225 aa
AA seq
DB search
MYVKELTLRGFKSFANATTLRFEPGITAVVGPNGSGKSNIVDALAWVMGEQGAKTLRGTS
MEDVIFAGTSSRPPLGRAQVSLTIDNSDRTLDIDYSEVTISRTIYRNGGSEYAINGSPAR
LLDVQELLSDIGLGAHMHVVVGQGRLDSILRATPADNRAFIEEAAGILKHRKRKERALRK
LQSTQENVERLDDLLTEIKRQLGPLRRQARVSRKADSIQISLRDAMSRLYADDAVQVMAS
RDQVRSDLAQIRGDLAREQQELTRVKLQIERLEDLASQSSPAMEAINQTWHQMSQLEERF
KSLAALASERSRSWTSQIVSIGGDDPDILLKRAGELAALARSEEGRNQDQRLAFDKETES
RAAAEKELASIRQMITQLRKDAQERDAHIASVREMIARQEARKQGLDGRESDLASQKASL
ATLRQETQARLDSLHAQEQAPEEVDEDRLEALRSAMDEARGRRDEARNKQRDLQSTVISL
KAKADALGDTLEARTTSTDMEKQEGVDVRGRLASFIRVEEGWEEAISKALGPFASALVLP
DSTHLLPAMALARQEKLGRAVALVPRIRLSDSFKLSDSSDLADRLGLIWAGKVVTPNPLA
EDADLACQIAQSVRFLLSDVFLAADLDQVQEVLTRADWGLDDCPFGQIAVRTGEVITPVG
ALGGSSQSPSDLSLAARRDKALAQAGKAQDEADSCQESIDSNDKAYTDLRAQVEETKTKL
TELRLRRQQADRDLAATQQSLESLDRRQADLDRKLASLADERQGLDSTLTTLQEDLRSAQ
TVEKADLNPDDLARQEHDREARLASQREKEVAAKISWNESSQKLQSYKRQADLLRSQAQQ
AQSRRARIEEENQERRAKAVQAVQVASLATQAAQTLMVHMDQVSAKRQELQAQASSHDEE
LTVLRARRRDLEPRVNALIQREHDSDVLRERVAAQVGQVTQKVMDDLGLNLDELLHSYSP
DLPVPLLDDYGRPIPLDQAVNGEGDDREETDDSQGRFRTEPYDRQKQEKRLAQARRDLAA
LGKVNPLATEEYDALQTRHQYLSEQRNEVVTSRDNLMKLIRDLDSTMVTVFKEAFDDTAA
AFEKVFGTLFQGGHGRLRLEDPDDLLNTGVIVEASPAGKRVRQLTLLSGGERSLTALALL
FAIFTARPSPFYILDEVEAALDDINLTRLLKAFNNLRQRSQLIIITHQQRTMSIADALYG
VTMRSDGVTAVISQKLQQGKVDLEG
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtcaaagagctgaccctgcgggggttcaaatccttcgccaacgccaccaccttg
cgtttcgagcccggcatcaccgccgtggtggggcccaacggctccggcaaatccaacatc
gtggacgccttggcctgggtgatgggggagcagggggccaagaccctgcgcggaacctcc
atggaggacgtgatcttcgccggcacctcctcgaggcctcccctgggtcgggcccaagtc
tctttgaccatcgacaactccgacaggactttggacatcgactattccgaagtgaccatc
tcccgtaccatctatcgcaacgggggctcggaatacgccatcaacgggtctccggcccgc
cttctggacgtgcaggagctgttgagcgacatcggcctgggcgcccacatgcatgtggtg
gtgggccagggccggctggattccatccttcgggccaccccggccgacaaccgggccttc
atcgaggaggccgccggaatcctcaaacaccgcaaacgcaaggagcgggccttgcgcaag
ctccaatccacccaggagaacgtggaacgcctggacgacctgctcacggagatcaaacgg
cagctagggcctttgcgccgccaagctcgggtgtcccgcaaggctgacagcatccagatc
agccttcgcgacgccatgagccgcctctacgcggacgacgccgtgcaggtcatggccagc
cgcgaccaagtccgttccgatctggcccagatccgcggcgacctggcccgggaacagcag
gagctgacccgggtcaaactgcagatcgagcgtctggaagacctggccagccaatcctcc
ccggccatggaggccatcaaccagacctggcaccagatgtcccaactggaagaacggttc
aaatccttggcagccttggcttccgaaaggtcgcggtcctggacttcgcaaatcgtctcc
atagggggagatgaccctgacatcctcctgaaacgggccggcgagctggccgccttggcc
cgcagtgaggaaggcaggaaccaggaccaacggttggccttcgacaaagagaccgagtcc
cgggcggcggcggaaaaggagctggcctccatccgtcagatgatcacccagctgcggaag
gacgcccaggaacgcgacgcccacatcgcctccgtgcgggaaatgatcgcccggcaggag
gcccggaagcaaggcttggatgggcgggagtccgacctggcctcccagaaggcttctttg
gcgacgctcaggcaggagacccaggccaggctggattccttgcacgctcaggagcaggct
ccggaagaggtcgatgaagaccggctggaagccttgcgctcggccatggacgaggcccgt
ggccggcgggacgaggcccggaacaagcagagggacctgcagtccacggtcatctccttg
aaagccaaggccgacgctttgggcgacactttggaggcccggacgacttccacggatatg
gagaagcaggagggggtcgacgttcgcggtcggctcgcttccttcatccgggtcgaggaa
gggtgggaggaagcgatctccaaggccttggggccgttcgcctccgccttggtcctgccg
gattccacccatcttttgccggccatggccctggcccgtcaggagaagttgggccgggcc
gtcgctttggtcccaaggatcaggctttctgattctttcaagctttctgattcttctgat
ctggcagaccgattgggcctgatttgggccgggaaggtcgtgacccccaatccgcttgcc
gaagatgccgatttggcctgccaaatcgctcaatccgtccgtttccttctttccgacgtc
ttcctggccgcggacttggaccaggtccaggaagtcttgacccgagcggactggggtctg
gatgattgtcctttcggccagatagccgtgcggaccggggaagtcatcaccccggtgggg
gctctgggaggttcctcccagtccccaagcgacctgagcctggccgcccgccgggacaag
gccctggcccaggcgggcaaggcccaggatgaggctgattcctgccaggagtccatcgat
tccaatgacaaggcttataccgatttacgggcccaggtggaagagaccaagaccaagttg
accgaactgcgtcttcgccgtcagcaggcggacagggacttggctgccacccaacaatcc
ttggagagcctggaccgcagacaggcggatctggaccggaaattggcttccttggccgat
gagaggcaaggcttggattccaccttgacgactttgcaggaagacctgcgttcggcccag
accgtggagaaggccgacctcaatccggatgacctggcccggcaggagcatgaccgcgaa
gccaggctcgcctcccaacgggagaaggaagtggcggccaagatctcttggaacgagtcc
agccaaaaactgcaatcctacaagcgccaggccgacctcctgcgttcccaggcccagcag
gcgcaaagccgccgggcccggatcgaggaagagaaccaggagcgccgggccaaggccgtc
caggccgtccaggtcgcttccctggccactcaggccgcccagaccctgatggtccacatg
gatcaggtcagcgccaaacggcaggaattgcaggcccaggcctcctcccatgacgaagag
ttgaccgtcttgcgggcccggcgcagggatttggagccccgggtcaacgccttgattcag
cgggagcatgacagcgacgttcttcgcgaacgggtggcggcccaggtgggccaggtcacg
cagaaggtcatggatgatctgggtctgaacctggacgagcttttgcacagctacagtccc
gatcttccggtcccgcttttggacgattacgggcggccgattcccctggatcaggccgta
aacggcgaaggggacgatcgcgaggaaaccgatgactcgcagggccgtttccgcacggag
ccttatgaccggcagaaacaggagaaacgtctggcccaggcccggcgggacctggccgct
ttgggcaaggtcaaccctttggccaccgaggaatacgacgctttgcagacccgtcatcag
tacctgagcgagcagaggaacgaagtggtcacctcccgcgacaacctcatgaagctgatc
agggacttggattccaccatggtcaccgttttcaaagaggccttcgatgataccgccgcc
gccttcgaaaaggtcttcggcaccctgttccagggcgggcatgggcgtttgcgcctggaa
gacccggatgacctgctcaacacgggggtcatcgtggaggccagcccggcggggaaaagg
gtccggcagttgaccctcctgtcgggaggggagaggtctttgaccgccctggccctgctc
ttcgccatcttcacggcccgccccagccccttctacatcctcgacgaagtggaggccgcc
ttggacgacatcaacctgacccgcctgcttaaagccttcaacaaccttcgtcagcgctcc
cagctcatcatcatcacccatcaacagaggaccatgagcatagcagacgccttgtatggg
gtgaccatgcggtccgatggggtcacggcggtcatctcccagaaactccagcaggggaag
gtggacctggaaggctga
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