Parascardovia denticolens: PSDT_0685
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Entry
PSDT_0685 CDS
T03978
Name
(GenBank) dipeptide ABC transporter substrate binding component
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
pdo
Parascardovia denticolens
Pathway
pdo01501
beta-Lactam resistance
pdo02010
ABC transporters
pdo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pdo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSDT_0685
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSDT_0685
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PSDT_0685
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdo02000
]
PSDT_0685
Transporters [BR:
pdo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
PSDT_0685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
BAR05204
UniProt:
E6JZ61
LinkDB
All DBs
Position
827703..829349
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AA seq
548 aa
AA seq
DB search
MKKHLFKSMVGAVAALSLSFGLAACGSGGSSSGATGEKSIVTVYNVEPQNKMIPGNVNEN
AGARVLDLIFAGLVTFDRNGIPHNEVAQSIKASKNNTFFTINLKSGWKFNDGTPVTASSF
TKAWSYTANATNAQLNASFFSVIKGYDALQRKGVSPQAQLSGLKVVNDRTFTVELNKPSQ
VFSIMLGYIAFVPMPESFYKDPKAFGENPVGDGPYKFKSWTHNRSIEVVRNKDYHGFLKP
KNAGITFKIYTDKESAYSDVRSGNLDVMDTVPTSALRTFRTDTSLKSYNKAGSRIETVTF
SPNLKHFGNDKEGILRRRAVSLAIDRQQIASKVFSGVVTPATDFVSPPISGHTDKLKGAD
VLTYNPSEAKKLWAQANAISPWTSSDSIVLSYNSDGGTKDVFDAIANQLTNTLKVKATTN
PVATFNEFRNEINQRKLVGVFRTGWMPDYPSAEDYLNPIYSSEAADGKGSNDGDYKNPKF
DAILSQAAGVSSTAEANKLYQQGEEILLAELPTIPLYYYNNYGVTTSGVSGYYQGWDSVP
RYEDLQKN
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcatttattcaaaagcatggtgggggcggtcgcggccttatccctctccttt
ggcctggccgcctgcggatccggcggttcctcctcgggagcgacgggggagaagagcatc
gtcaccgtctacaatgtggagccccagaacaagatgatccccggcaatgtgaacgaaaac
gccggcgcccgggtcttggacctgatcttcgccggcctggtcactttcgatcgtaacggc
atcccccacaatgaggtcgcccagtccatcaaggccagcaaaaacaacaccttcttcacc
atcaacctcaagagcggatggaaattcaacgatgggacccccgtcaccgcctcctccttc
accaaagcctggagctacacggccaacgcgaccaacgcccagctgaacgcaagcttcttc
tcagtcatcaaggggtacgacgccctgcagcgcaagggggtctctccccaagcccaactg
tccggactcaaagtcgtcaatgaccggaccttcacggtggagctgaacaagccttcccag
gtcttctccatcatgctgggctacatcgccttcgtccccatgcccgaatccttctacaag
gaccctaaggccttcggcgagaacccggtgggcgatggaccctacaagttcaagtcctgg
acccacaacaggtccatcgaggtcgtcaggaacaaggattatcacggcttcctcaagccc
aagaacgcgggcatcaccttcaagatctacacggacaaggaatcggcctactccgacgtg
cggtccggcaacctggatgtcatggacaccgtgcccacttcggccttgagaaccttccgc
acggatacctccctcaagtcctacaacaaggccggatcccgcatcgagacggtgactttc
tcccccaacctcaagcatttcggcaatgacaaagagggaatcctccgacgccgggccgtc
tccctggccatcgaccggcagcaaatcgcctccaaggtcttctccggcgtggtcaccccg
gccactgacttcgtttctccccccatctcgggccatacggacaagctcaagggggcggac
gtgctgacctacaatcccagcgaagccaagaaactctgggcccaggcgaacgccatcagc
ccctggacctcctccgactccatcgtcctgtcctacaactccgacggaggcaccaaggac
gtgttcgacgccatcgccaaccagctcacgaacacgctgaaggtgaaggcgaccaccaac
cccgtggccaccttcaacgagttccgtaatgagatcaaccaacgcaagctggtcggcgtc
ttccgcacgggctggatgcctgattacccttcggccgaggattacctgaacccgatctat
tcatccgaagccgctgacggcaaaggttccaacgacggcgattacaagaaccccaagttc
gacgccatcctcagccaggcggccggggtcagctcgaccgcggaggccaacaagctctac
cagcagggtgaagagatccttctggccgagctgccgaccatccccctgtattactacaac
aactacggggtgaccacgagcggcgtcagcggttactaccagggatgggattccgtcccc
cgctatgaggacctccagaagaactga
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